Gene Amir_1275 details

Gene Information

• Locus tag: Amir_1275
• ID: 8325452
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 1413651
• End bp: 1415540
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 644941820
• Product: DNA primase
• Protein accession: YP_003099073
• Protein GI: 256375413
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0358] DNA primase (bacterial type)
• TIGRFAM ID: [TIGR01391] DNA primase, catalytic core

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCAGGAC GCATCCGGGA GACCGACATC GCGCTGGTGC GGGACCGCAG CAGCATCGAG 
GACGTCGTCG GCGACCACGT CTCCCTGCGC CGGGCGGGCG GCGGTTCGCT GAAGGGCCTG 
TGCCCGTTCC ACGACGAGAA GTCGCCGTCG TTCAACGTCC GCCCCAGCCA CGGCACGTTC 
CACTGCTTCG GCTGCGGCGA GGGCGGCGAC GTCATCGCCT TCATCATGAA GATCGAGCAC 
CTGGGCTTCG TGGAGTCCGT GGAGCGGCTC GCGGACCGCG CGGGCATCCA GCTGACCTAC 
GAGGGCGGCG GCGCGACCAT CCAGCGCGAC CGCGGCACCC GCAGCAGGCT GCTGGAGGCG 
CACCGGGCCG CCGCCGAGTT CTACGCCGAG CAGCTGGCCA CGCCGGACGC GATGCCCGCC 
CGCGAGTTCC TGGCGCAGCG CGGCTTCGAC GAGGCCGCCG CGCGCCAGTT CGGCTGCGGC 
TTCGCCCCGC ACGGCTGGGA CAAGCTCACC AAGCACCTGC TCGGGCGCGG GTTCGAGCTG 
ACCGAGCTGA TCAAGGCGCA GCTGACCAAG GAGGGCCGCC AGGGCCCGAT CGACCGGTTC 
CACCGCAGGC TGCTGTGGCC GATCCGGGAC CTGGGCGGCG ACGTGGTCGG GTTCGGCGCG 
CGCCGGATCT TCGACGACGA CCCGATCCAG GCCAAGTACC TGAACACCAG CGAGTCGCCG 
ATCTACAAGA AGTCGCACGT GCTGTTCGGG CTGGACCTGG CCAAGCGGGA GATCGCCAAG 
CGGCGGCAGG CCGTGGTGGT CGAGGGGTAC ACCGACGTCA TGGCGATGCA CCTGGCGGGC 
GTGCCCACCG CGGTCGCGTC GTGCGGCACG GCGTTCGGCG CCGACCACAT GAACGTGCTG 
CGCAGGCTGC TCATCGACGA CTCGGTCAAC GGCGAGGTCA TCTTCACCTT CGACGGCGAC 
GCGGCCGGGC AGAAGGCGGC GCTCAAGGCG TTCGAGGGCG AGCAGCAGTT CTCGGCGCAG 
ACGTACATCG CGGTCGCGCC GGACGGCATG GACCCGTGCG AGCTGCGCCA GGAGAAGGGC 
GACGTGGCGG TGCGCGACCT GGTGGCCAGG CGCACCCCGC TGGTGGAGTT CGCGATCAAG 
GCCCAGCTGC GCGACTACGA CCTCGACTCG GTCGACGGGC GCGCCGAGGC GCTGCGGAAG 
ATGGTGCCGT TCGTCGCGCA GATCAAGGAC AGCTCCAAGC GCGACGGCTA CGCCACGAGG 
CTGGCGTGGT GGGTCGGCTG GGAGGACGAG GCGTCGGTGG TGAGGCGGGT CCGCGAGACC 
GCGACCGGCA CCGCGAAGGC CGCCCCGCGC CGCCGCCCGG TGGACCCGAA CCAGGGTGCG 
CTCGACGTGG CCGTGGACGC CCCCCCGCGC CCGAACCCGC GCGACCCGGC GCTGTGGCAC 
CAGCGGGAGG CGCTGAAGGC GGCGCTGCAG GTGCCGGAGA TGGTGAGCCC GTACTACGAC 
TCGCTGCCGG ACGAGGCGTT CACGAACCCG CTGTACCTGG CGTTGCACCG CGCGCTGCGC 
GAGGCGGGCG GCACCGCGTC CGGCCTGACC GGGCCCGCGC TGGTGGACGC GGTGGGCCAG 
GCCTGCCCGG TGCCGTCGGC GAGGCCGCTG CTGACGGAGC TGGCGGTGGA GCCGCTGCGG 
ACCAAGGGCG ACGAGTACCG GTACGTGCAG AGCGTGCTGG CGCGGTTGCA GCAGGTCCTG 
GTCGGGGCGC AGATCACCGA GATCAAGTCG AGGCTGCGGC GGGTGTCGCC GATCGAGGAG 
GCGGACGAGT ACCGCGCCCT GTTCGGGGAC CTGATCGCGC TGGAGGAGTA CCACAAGGAG 
CTGGGGCAGC AGGGCATCAA CGGCCTGTAG 

 

Protein sequence

MAGRIRETDI ALVRDRSSIE DVVGDHVSLR RAGGGSLKGL CPFHDEKSPS FNVRPSHGTF 
HCFGCGEGGD VIAFIMKIEH LGFVESVERL ADRAGIQLTY EGGGATIQRD RGTRSRLLEA 
HRAAAEFYAE QLATPDAMPA REFLAQRGFD EAAARQFGCG FAPHGWDKLT KHLLGRGFEL 
TELIKAQLTK EGRQGPIDRF HRRLLWPIRD LGGDVVGFGA RRIFDDDPIQ AKYLNTSESP 
IYKKSHVLFG LDLAKREIAK RRQAVVVEGY TDVMAMHLAG VPTAVASCGT AFGADHMNVL 
RRLLIDDSVN GEVIFTFDGD AAGQKAALKA FEGEQQFSAQ TYIAVAPDGM DPCELRQEKG 
DVAVRDLVAR RTPLVEFAIK AQLRDYDLDS VDGRAEALRK MVPFVAQIKD SSKRDGYATR 
LAWWVGWEDE ASVVRRVRET ATGTAKAAPR RRPVDPNQGA LDVAVDAPPR PNPRDPALWH 
QREALKAALQ VPEMVSPYYD SLPDEAFTNP LYLALHRALR EAGGTASGLT GPALVDAVGQ 
ACPVPSARPL LTELAVEPLR TKGDEYRYVQ SVLARLQQVL VGAQITEIKS RLRRVSPIEE 
ADEYRALFGD LIALEEYHKE LGQQGINGL