Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1255 |
Symbol | recO |
ID | 8325432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1396904 |
End bp | 1397656 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644941800 |
Product | DNA repair protein RecO |
Protein accession | YP_003099053 |
Protein GI | 256375393 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.361247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCAACC TGTACCGGGA CACGGGGGTG GTCCTGCGGG TGCAGAAGCT CGGCGAGGCC GACCGGATCA TCACGCTGCT CACCCAGCGC CACGGCAAGC TGCGCGCGGT CGCCAAGGGC GTCCGCCGCA CCTCGTCGCG GTTCGGGGCG CGGCTGGAGC CGTTCGGGCA CGTCGACGCG CAGTTCCACC CCGGCCGCAC GCTCGACGTC ATCACCCAGG TGGAGACGAT CGACGCGTTC GGCGTGGTCC TGGTCGACGA CTACCAGCGG TACACGGCGG GCTGCGCCGT GCTGGAGACC GCCGACCGGC TCACCTCCGA GGAGGGCGCC CCGGCCCTGC GGCTGTACCT GCTGGTCACC GGGGCGCTGC GGGCGCTCGC CGACGGGCGG CGCGACCCGT CGCTGCTGCT CGACGCGTTC CTGCTGCGCG CGATGGCGTT CGCGGGCTGG GCCCCGGCGG TGGGCGAGTG CGCCCGCTGC GGCGAGCCCG GCCCGCACCG GTCGTTCAAC GTGCAGGCGG GCGGGGTGGT CTGCGCCAAC TGCCGCCCGC CCGGCAGCGC CTCACCATCG GGTGAGACCC TGCGCTTGCT CGCCGCGCTG CTGCACGGCG AGTGGGACGT GGTCGACGAG ATCCCGACCG GTCCGCGCCG CGAGGGCAGC GGTCTGGTCG CGGCGCACCT CCAGTGGCAC TTGGAGCGCC AGCTCCGGTC GCTTCCCCTG GTGGAGCGCA GGCAGTCGAC CGCCGAGAAC TAA
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Protein sequence | MANLYRDTGV VLRVQKLGEA DRIITLLTQR HGKLRAVAKG VRRTSSRFGA RLEPFGHVDA QFHPGRTLDV ITQVETIDAF GVVLVDDYQR YTAGCAVLET ADRLTSEEGA PALRLYLLVT GALRALADGR RDPSLLLDAF LLRAMAFAGW APAVGECARC GEPGPHRSFN VQAGGVVCAN CRPPGSASPS GETLRLLAAL LHGEWDVVDE IPTGPRREGS GLVAAHLQWH LERQLRSLPL VERRQSTAEN
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