| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1193 |
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| Symbol | |
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| ID | 8325370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1335135 |
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| End bp | 1337210 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644941738 |
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| Product | ATP-dependent DNA helicase, RecQ family |
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| Protein accession | YP_003098991 |
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| Protein GI | 256375331 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.346189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGACA ACGCGCTCCG CGCACTGGCG GAGGAGAGGC TCAGGGCACT GGCCGGTCCG
GGCGCCGTGC TGCGCGAGGA CCAGTGGACG GCGATCCACG CGCTGGTGGC CCTGCGCAGA
CGCGCGCTGG TCGTCCAGCG CACGGGGTGG GGCAAGTCGG CGGTCTACTT CATCGCCACC
GCGCTGCTGC GCTCGCTGGG CGAGGGGCCG ACGGTGATCG TGTCCCCGCT GCTGGCGCTG
ATGCGCAACC AGGTCGACGC GGCGGCGCGG GCGGGCGTGC ACGCGGCGAC GATCAACTCG
GCGAACACCG ACGAGTGGCA GGACGTCCAG GAGCGGGTGG CGGCGGGCGA GGTCGACGTG
CTCCTGGTGT CGCCGGAGCG GCTGAACAAC CCCGACTTCC GGGACACCGT GCTGCCCTCG
CTGACCGCGT CGGCCGGGCT GCTGGTGGTC GACGAGGCGC ACTGCATCTC CGACTGGGGG
CACGACTTCC GGCCCGACTA CCGGCGGCTG CGCACGCTGC TGACCGAGCT GCCCGCCGGG
GTGCCGGTGC TGGCGACCAC GGCCACGGCC AACGACCGGG TGGTGCGGGA CGTGACCGAG
CAGCTGGGGC TCGGCGCGGG CTCGGACACG CTGGTGCTGC GCGGGCCGCT GGACCGGGAG
AGCCTGCGGC TGGCGGCGGT GCGGCTGCCC ACGGCCGAGG CGCGGCTGGC GTGGCTGGCC
GAGCGGCTGG CGGAGCTGCC GGGGTCGGGG ATCGTGTACG CGCTGACGGT CGCGGCGGCG
GACGACGTGG CGGCGTTCCT GCGCGAGCGC GGGTACGAGG TGGTGGCCTA CTCGGGGCGG
ACGGACCCGG CGGAGCGGCA GCGGGCCGAG GAGGACCTGC TGGCCAACCG GGTGAAGGCG
CTGGTGGCGA CCTCCGCGCT GGGCATGGGG TTCGACAAGC CCGACCTGGG GTTCGTGGTG
CACCTGGGCG CGCCGCCGTC GCCGATCGCG TACTACCAGC AGATCGGGCG CGCCGGGCGT
GGTGTGGAGC GGGCGGAGGC GCTGCTGCTG CCGGGGCCGG AGGACCGGGA CATCTGGGCG
TACTTCGCGT CGCTGGCGTT CCCGCCGGAG CGGGTGGTGC GGCAGGTGCT GGCGGCGCTG
ACCGACGAGC CCCGGTCGAC GGCCGCGCTG GAACCGGTGG TGGAGCTGTC CCGCACCCGG
TTGGAGGTGG TGCTGAAGGT GCTCGACGTG GACGGCGCGG TGCGGCGGGT GCGCGGCGGG
TGGGTCTCGA CGGGGCGGCC GTGGGAGTAC GACGAGGAGC GGTACGGGCG GATCGAGCGG
GCGCGGCAGG CCGAGCAGCG GGCGGTGCTC GACTACCTGG ACACCGAGGG CTGCCGGATG
GAGTTCCTGC TGCGGCAGCT CGACGACCCG CACGCGGCGC CGTGCGGGCG GTGCGACAAC
TGCACGGGGC AGCGGGTGTC GGCGGCGGTG TCCGAGGGCG CGGCGACGGC GGCGCGGGAG
CGGCTGCTGC GGCCGGGCGT GGACGTCGCG CCGCGCAAGA TGTGGCCGAC CGGGATGGCG
GCGGCGGGGG TGTCGCTGTC GGGGCGCATC CCGGCCGGGG AGCAGGCGGC GACCGGGCGG
GCGCTGGGAC GGCTGACGGA CATCGGGTGG GGCAACCGGC TGCGGTCGCT GTTCGCCGAG
GCCGACCGGG AGTTGCCGGA CGAGGTGTTC GCGGCGTGCG TGCAGGTGCT GTCGGCGTGG
GGCTGGGAGC GGCGGCCGGT GGGGGTCGTG TCGGTGGGGT CGCGGACGCG GCCGGAGCTG
GTGGGCAGCT TCGCGCGGCG GATCTCGGAG GTGGGCAGGC TGCCGCAGCT GGGGACGGTG
TGGCTGGGGA CGGCGGTGCG GCGGGCGAAC AGCGCGCAGC GGCTGGCGGG GCTGGTGTCG
GCGTCGCGGG TGCCGGATGT GAGCGGGGTG GACGGGCCGG TGCTGCTGGT GGACGACCAG
GTCGACACGG GCTGGACGAT GACGGTGGCG GCGAGGCTGC TGCGCGGCGC GGGGGCGCCG
GAGGTGCTGC CGTTCGCGCT GGCGGTGACG GCGTGA
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| Protein sequence | MDDNALRALA EERLRALAGP GAVLREDQWT AIHALVALRR RALVVQRTGW GKSAVYFIAT
ALLRSLGEGP TVIVSPLLAL MRNQVDAAAR AGVHAATINS ANTDEWQDVQ ERVAAGEVDV
LLVSPERLNN PDFRDTVLPS LTASAGLLVV DEAHCISDWG HDFRPDYRRL RTLLTELPAG
VPVLATTATA NDRVVRDVTE QLGLGAGSDT LVLRGPLDRE SLRLAAVRLP TAEARLAWLA
ERLAELPGSG IVYALTVAAA DDVAAFLRER GYEVVAYSGR TDPAERQRAE EDLLANRVKA
LVATSALGMG FDKPDLGFVV HLGAPPSPIA YYQQIGRAGR GVERAEALLL PGPEDRDIWA
YFASLAFPPE RVVRQVLAAL TDEPRSTAAL EPVVELSRTR LEVVLKVLDV DGAVRRVRGG
WVSTGRPWEY DEERYGRIER ARQAEQRAVL DYLDTEGCRM EFLLRQLDDP HAAPCGRCDN
CTGQRVSAAV SEGAATAARE RLLRPGVDVA PRKMWPTGMA AAGVSLSGRI PAGEQAATGR
ALGRLTDIGW GNRLRSLFAE ADRELPDEVF AACVQVLSAW GWERRPVGVV SVGSRTRPEL
VGSFARRISE VGRLPQLGTV WLGTAVRRAN SAQRLAGLVS ASRVPDVSGV DGPVLLVDDQ
VDTGWTMTVA ARLLRGAGAP EVLPFALAVT A
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