| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1178 |
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| Symbol | |
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| ID | 8325355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1316811 |
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| End bp | 1320125 |
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| Gene Length | 3315 bp |
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| Protein Length | 1104 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 644941725 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003098978 |
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| Protein GI | 256375318 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00127631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCAT CGAGCCCCGC GCGGCAGGTG GACCCGAGAA CGCGGGGCGC GCACCGCCCG
CCGCTGGTCG GCAGGGCGGG GGAGCTGCGC GCCTTCCGGG CGCTGCTGCG CGCCGCGTCG
GCCGGGCGCA CCGTCGGGGT GCTGGTGGAC GGCGAGTTCG GCTCCGGCAA GTCCGCGCTG
CTGGCCGAGG TCGCCGCGCA GGCCCGCGAC CTGGGCTTCA CCGCCGCGTC CGCGGTCGCC
ACCCGGCTGG AGAGCGAGCT GCGCGGCGCC GTCGTCGGGC AGCTCGCCGA GGACCTGCTG
GACGGCCCCG GTGACGTGGC GCCCTCGCTG GAGGCGTTCC TGCAGCTGGT GCGCGCCTCG
GTCGAGCGCG CCCCGCTGCT GCTCGTGGTC GACGACGCGC ACGTCGCCGA CGCCTGGTCC
CTGCGCTGCC TGGCCTACCT GCTGCGCAGG CTCCGCGACC GCCCCCTGCT GGTCGTGCTG
TCCTCGGCGA CGGGCCAACC GCCCGCCGCC GACCTGCTGC TGTCCGAGCT GCTGCCCGAG
GACCACCACC TGCTGCGCCT GCCCCGCCTG ACCCCCGACG CGGTCGCCGA CCTGCTGGCG
GGCGTCCTGC CCGCCCCCCT CCCCGAGGGC CTGGCCGCGG CGGCCCACGA GGCCACGGCG
GGCAACCCCA GACTGCTGGA GTCCCTGGTC GCGGTCCTGC GCGCCCGCGC GGCCCTCGGA
CCGAAGGCCC GGATCACCCG CACTCCGGGC CCCGCAGGTT TCGGTGCCCA GGCGCCCGGC
CGTTCCGGCG CGGACACCCC CGGTCGTCCA GGTCCGGGGG ACACCGCCGG AGGTGGTCCC
GGTTCCGGGC CTGCGGCTCG CGGTCGTTCC AGCGGTGCCG TACCCCAGGG CGGTGCCACG
CCCGGCGACG CCGTCCGGAG CTCCGTCGAT CCCGGCCCTG GCACAGGAGT CCCGGCTGTC
GTCGGCCCCG GCGCCACGCC GCCGGGCCGT GCCGGGTTCG ATCCCGCGTC GTTCGCCCCC
GCCGAGTTCG ACCCGACTGG GTTCGACCCG ACTGGACTCG CCCCCGGCAC GCCCGCTGCC
TTCGACGTCG CCGCGCTCGT CCCGTCCGGG TTCGGCTCCG CCTCGCTCGT GCCCGCCGCG
TTCGGCGTCT CCGCACTCGC CACCGACCTG GATCCCGCAG ACCTCGACCC CGCCGCCCTG
GACCCCGCCG AGGTCGCCGG GCTCGCCGCG CCCGAGCTGG GGGAGCTGCT GCGCCTGCGC
CTGCGGGTCC GACCCGGCGC GGCCGAGGTG GTGCGGGCGA CCGCCGTCCT CGGCGAGGAC
GCCACCGTCG ACCGGGTCGC CGAGCTGGCA GGCGTCGAGC ACCGCGAGGT GCTCGCCCTG
GTCGACGCCC TGGTCCGGCT GCGCCTGCTC CGCGACGGCA CCCCGCTCGC CTTCAACCAC
CCCTACCTGC GGGCCTGCGT GCTCGCCGAC CTGCCGGTCG CCACCCGCGC CGCCGACCAC
GCCCGCGCCG CCTCGGCGCT CGCCGAGGCC GGGGAACCGG CCAGGCGGGT CGCCGCGCAC
CTGCGCCAGG CCCACGACGT GCCGCTGCCC TGGGGCGTCC CGGTGCTGCG CGAGGCCGCC
CGCTCGGCGC TGCGCGCGGG CGACCCGGCC GAGGCCCGCG CCTGTCTGGA GCGCGCGCTG
CGGGAGCGCG CCGCGCCCGC CGAGCGCCTG GGCGCGCGCC TGGAGCTGGT GCACGCGGTG
TTCCTCGCCG ACCCGGCCGA GGGCGCGTCG CTGCTGCGCG AGAGCCTCGT CCTCGCCGAC
GACACCGGCC TGGCCGCCGA CCAGGCCGCC CAGCTGCTGC TGCGGCTGTG CCGCCCGGTC
GACGCCCGGT TCGCCCTCGC CCTCGGCCCG CAGCTGGTCG CCAGGCTCGG CCCCGCCGAC
CACGACCGCT CGTGGCGGCT GCGCGCCCTG TGCTTCCTCG CGGGCGCGGG CAACAACCCC
GGCCTGGCGC TGCGCGCGGG CGTCCTGCTG CGCGAGCTGG AGGCCGAGCC GCCCACGTCG
CCCGAGCTGC GGCAGACCCG CTCCGCCCTG CTCGCGCTCG GCCACGCCCT GCGCGGCGAC
TCGGCGGCGC GGGCCGCCGG GCACGCCGAG CTGGCGCTGA CCGGACCGGA CACCGGGGTG
CTCACCCGGC CGTTCGCGTT CGCCGTCGCC ACCTGCTTCC TCGCCGACTC GCCCCGGCTG
TCCGAGGGGC TGCGGCACGC GCTCGGCTCC CGCGCCGAAC CCCGCGACCA CCACCTCGAC
CGGGGCGCGG CGCTCGCGCT CGCGCAGGGC CTGCACCACC TGGCCACCGG CGACCTCGTG
CGCGCCAACA CCTTCCTGAA GTGGCAGCTG CGGCTGTTCG CCGAGCAGAG CGCCCCGCCG
CGCGACCGGC TGGGCGACCG GCCCGCTGAC GCGGGGGAGT GGGCAGGCCC GGTCGAGGAC
TGCCCGATGG CGGTGCTCTG CGCGGCCAGG CTCACCGAGG CGCTGGTCGA CCTCGGCCGG
TTCGACGAGG CGCGCGAGCT GCTGGCCAAG CACGGCCTCA CCGACCGGCT GCCCGAGGTG
TTCGGCCACA ACACCACCCT GTGGGCGCGC GGCAGGCTCA AGCTCGCGGG CGGTGACGCC
GAGGGCGCGC TGACCGACGC GCGCGAGTGC GGCAGGAGGC TGGCCGCCGC CCAGCTCGGG
TCGGCCCCGC TGCTGCCGTG GCGACCGCTG GCCGTGCGCG CCCTGCTCGC GCTGGGCCGC
CGCGACCAGG CGGTGCGGCT GGCCGGGGAG GAGCTGGCGG TCGCCCGCCG CTGGGGCGCC
CCGAGGGCGC TCGGCGTCGC GCTGCTCGCG GTGGGCCTGA CCAGCGAGGA CGACGCCGGG
ACCCGCGCGC TCGCCCAGGC CGTCCAGCAC CTGGAGGGCA CCACCGCCCG GCTCGCGCTG
GCCGAGGCGC TGTGCGAGCT GGGCGCGCGG CTGCGCAGGC GCGGCAGGCC CGAGCGGGCC
ATCCCGCACC TGCGGCGGGC CGTGGAGCTG AGCGCGGCCT GCGAGGCCAA ACCGCTCATC
GCGCGCGCGG GAGAGGAGCT GCGGGCCTGC GAGCCGACCA CCGTCCAGGG CACCGAGCAC
GGCCTGACCA GGCAGGAGGT CCGGGTCGCC GGCATGGCCG CGCAGGGCCT GACGAACCGG
CAGATCGCCG AGGCGCTCTT CCTCACCCGG CGCACCGTCG AGCTGCACCT GTCCGGGGCC
TACCGCAAGC TCGGCATCGC GGGCCGCGCC GACCTGCCCG CCGCCCTCAC TCCACCGGTT
CCCCCGGCAG GGTGA
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| Protein sequence | MSASSPARQV DPRTRGAHRP PLVGRAGELR AFRALLRAAS AGRTVGVLVD GEFGSGKSAL
LAEVAAQARD LGFTAASAVA TRLESELRGA VVGQLAEDLL DGPGDVAPSL EAFLQLVRAS
VERAPLLLVV DDAHVADAWS LRCLAYLLRR LRDRPLLVVL SSATGQPPAA DLLLSELLPE
DHHLLRLPRL TPDAVADLLA GVLPAPLPEG LAAAAHEATA GNPRLLESLV AVLRARAALG
PKARITRTPG PAGFGAQAPG RSGADTPGRP GPGDTAGGGP GSGPAARGRS SGAVPQGGAT
PGDAVRSSVD PGPGTGVPAV VGPGATPPGR AGFDPASFAP AEFDPTGFDP TGLAPGTPAA
FDVAALVPSG FGSASLVPAA FGVSALATDL DPADLDPAAL DPAEVAGLAA PELGELLRLR
LRVRPGAAEV VRATAVLGED ATVDRVAELA GVEHREVLAL VDALVRLRLL RDGTPLAFNH
PYLRACVLAD LPVATRAADH ARAASALAEA GEPARRVAAH LRQAHDVPLP WGVPVLREAA
RSALRAGDPA EARACLERAL RERAAPAERL GARLELVHAV FLADPAEGAS LLRESLVLAD
DTGLAADQAA QLLLRLCRPV DARFALALGP QLVARLGPAD HDRSWRLRAL CFLAGAGNNP
GLALRAGVLL RELEAEPPTS PELRQTRSAL LALGHALRGD SAARAAGHAE LALTGPDTGV
LTRPFAFAVA TCFLADSPRL SEGLRHALGS RAEPRDHHLD RGAALALAQG LHHLATGDLV
RANTFLKWQL RLFAEQSAPP RDRLGDRPAD AGEWAGPVED CPMAVLCAAR LTEALVDLGR
FDEARELLAK HGLTDRLPEV FGHNTTLWAR GRLKLAGGDA EGALTDAREC GRRLAAAQLG
SAPLLPWRPL AVRALLALGR RDQAVRLAGE ELAVARRWGA PRALGVALLA VGLTSEDDAG
TRALAQAVQH LEGTTARLAL AEALCELGAR LRRRGRPERA IPHLRRAVEL SAACEAKPLI
ARAGEELRAC EPTTVQGTEH GLTRQEVRVA GMAAQGLTNR QIAEALFLTR RTVELHLSGA
YRKLGIAGRA DLPAALTPPV PPAG
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