Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1176 |
Symbol | |
ID | 8325353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1313403 |
End bp | 1315370 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644941723 |
Product | Radical SAM domain protein |
Protein accession | YP_003098976 |
Protein GI | 256375316 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGTCG ACTCTGTTTT CCCCTTGCTG GAGCCCCTGC TCCCCAGGGT CTCCAAGCCG GTGCAGTACG TCGGCGGGGA GCTGAACGCC ACCACCAAGG ACTGGGACTC CGCCGCGGTG CGGTGGGCCC TGATGTACCC GGACGCCTAC GAGGTCGGGC TGCCCAACCA GGGCGTCATG ATCCTCTACG AGGTGCTCAA CGAGCAGCCT GACGTCCTGG CCGAGCGCAC CTACGCGGTC TGGCCGGACC TGGAAGCGCT CATGCGCGAG CACCGCGTCC CCCAGTTCAC CGTGGACTCC CACCGGCCGG TCGGCGCGTT CGACCTGCTC GGCGTCAGCT TCTCGACCGA GCTGGGCTAC ACGAACCTGC TCACCGCACT CGACCTGGCG GGCGTGCCCG TGCACGCCGC CGACCGCACC GAGGACCACC CGATCGTGGT GGCCGGTGGG CACGCCGCGT TCAACCCCGA GCCGATCTCC CGCTTCGTCG ACGCCGCCGT CCTCGGCGAC GGCGAGGAGG CGGTCCTGGA GATCACCGAC ATCGTCCGCG CCTGGAAGGC CGAGGGCCGC CCCGGCGGGC GGGACGAGAT CCTGACCAGG CTGGCCGAGA CCGGCGGCGT GTACGTGCCC CTGTTCTACG ACGTGGAGTA CCTGCCGGAC GGCCGCATCC AGCGCGTCGT GCCCAACCGC GAGCGGGTCC CCTACCGGGT GTTCAAGCGC ACCACGATGG ACCTGGACGC CTGGCCGTAC CCGAAGCAGC CGCTGGTGCC GCTCGCCGAG AGCGTGCACG AGCGGATGAG CGTGGAGATC TTCCGGGGCT GCACGCGCGG CTGCCGCTTC TGCCAGGCGG GCATGATCAC CCGCCCGGTG CGCGAGCGCT CGATCGAGGG CATCGGCGCG ATGGTGCAGC GCGGCCTGGC GGCGACCGGC TTCGAGGAGG TCGGCCTGCT CTCGCTCTCC AGCGCGGACC ACTCCGAGAT CGCCGAGGTC ACCAAGGGCC TCGCCGACCG GTACGAGGGC ACCAACACCA GCCTGTCGCT GCCCAGCACG CGGGTGGACG CCTTCAACAT CGACCTGGCC AACGAGCTGT CCCGCAACGG CCGCCGCTCG GGCCTGACCT TCGCCCCCGA GGGCGGCAGC GAGCGCATCC GCCGCGTCAT CAACAAGATG GTGTCGGAGG AGGACCTGAT CCGGACGGTC AGCGCGGCGT TCGCGGCGGG CTGGCGGCAG GTGAAGCTGT ACTTCATGTG CGGCCTGCCG ACCGAGACCG ACGACGACGT GCTGCAGATC GCCGAGATGG CCAAGAACGT CATCCGCGCG GGCCGCGAGG CCAGCGGGCG CAAGGACGTG CGCTGCACCA TCTCCATCGG CGGGTTCGTG CCCAAGCCGC ACACCCCGTT CCAGTGGGCC GGGCAGTGCG ACCCGGAGAC CGTGGACCGC AGGCTGCGCA AGCTGCGCGA GGCGGTCAAC TCGGACCGGA ACCTGGGCCG CAACATCGGG ATGCGCTACC ACGACGGGCA GCCGTCGCTG ATCGAGGGAC TGCTCTCGCG CGGCGACCGG CGGATCGGCG CGGTCATCGA GCGGGTGTGG CGCGAGGGCG GCCGGTTCGA CGGCTGGTCC GAGCACTTCT CCTACGAGCG CTGGGTGCAG GCGGCCAAGA CCGAGCTGGA GCCGGTGGGC GTGGACCTGG AGTGGTTCAC CACCCGCGAG CGCGAGGAGC TGGAGGTCCT GCCCTGGGAC CACCTGGACT CCGGGCTGGA CAAGGAGTGG CTCTGGGCGG ACTGGCAGGA CGCCCTGGAC GAGCGCGAGC AGGACGACTG CCGGTGGACG CCGTGCTTCG ACTGCGGCGT GTGCCCGGCG ATGGGCACCG ACATCGAGGT GGGGCCGACC GGGCGGACGC TGCTGCCGAT CTCCCCGGTG GGCACCGGCT CGCCGGTGCG CAACCCCGCC CTGACCCACC AGCACTGA
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Protein sequence | MSVDSVFPLL EPLLPRVSKP VQYVGGELNA TTKDWDSAAV RWALMYPDAY EVGLPNQGVM ILYEVLNEQP DVLAERTYAV WPDLEALMRE HRVPQFTVDS HRPVGAFDLL GVSFSTELGY TNLLTALDLA GVPVHAADRT EDHPIVVAGG HAAFNPEPIS RFVDAAVLGD GEEAVLEITD IVRAWKAEGR PGGRDEILTR LAETGGVYVP LFYDVEYLPD GRIQRVVPNR ERVPYRVFKR TTMDLDAWPY PKQPLVPLAE SVHERMSVEI FRGCTRGCRF CQAGMITRPV RERSIEGIGA MVQRGLAATG FEEVGLLSLS SADHSEIAEV TKGLADRYEG TNTSLSLPST RVDAFNIDLA NELSRNGRRS GLTFAPEGGS ERIRRVINKM VSEEDLIRTV SAAFAAGWRQ VKLYFMCGLP TETDDDVLQI AEMAKNVIRA GREASGRKDV RCTISIGGFV PKPHTPFQWA GQCDPETVDR RLRKLREAVN SDRNLGRNIG MRYHDGQPSL IEGLLSRGDR RIGAVIERVW REGGRFDGWS EHFSYERWVQ AAKTELEPVG VDLEWFTTRE REELEVLPWD HLDSGLDKEW LWADWQDALD EREQDDCRWT PCFDCGVCPA MGTDIEVGPT GRTLLPISPV GTGSPVRNPA LTHQH
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