Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1170 |
Symbol | |
ID | 8325347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1303945 |
End bp | 1309512 |
Gene Length | 5568 bp |
Protein Length | 1855 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644941717 |
Product | alpha-1,6-glucosidase, pullulanase-type |
Protein accession | YP_003098970 |
Protein GI | 256375310 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02103] alpha-1,6-glucosidases, pullulanase-type |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGTCGGT CCGTCGCCGC GCTCATCGCG CTGGTCCTCG TCCAGCCCGC AGCCGTCACC CACCAGGCCC AGGCGCAAGC GGCCCCGGAA CCGGGAACCC GTTTAGCCGT CGGCAAGACC ACCGACCTCC CGCCGGGCGC CCGAGCCGGG GACCAGGCCC TCGCCAAGGA CGCCCTCCGC GACGCCCCCA CCGGCGAGCG CTTCTACTTC GCCCTCCCCG ACCGCTTCGC CAACGGCGAC CCGTCGAACG ACCGCGCCCA CACCGGCGGC GACCGCGGGC AGCACGGCTT CGACCCCACC GACAAGGGCT TCTACCACGG CGGCGACCTC AAGGGCCTTC AGCAGGAGCT CGGCTACCTC GACGACCTCG GCACCACCGC CCTCTGGCTC ACCCCGGTCT TCCGCAACCG CTGGGTCCAG GGCGCCGGTC CCGACGCGTC CGCCGGCTAC CACGGCTACT GGACCACCGA CTACACCTCG CTCGACCCGC ACTTCGGCAC CACCGACGAC ATGCGCCGCC TCATCCGCGA CGCGCACCGC CGGGGCATCA AGGTCTTCTT CGACATCGTC GCCAACCACA CCGCCGACGT CATCGACTAC GCCGAGGGCT CCCACGACTA CGTCAGCTCG AAGGCCGTCC CGTACCTGGA CCGCGAGGGC AACCCGGTCG ACGTCGAGGA GCTCGCGGGC AGCCCGGACT TCCCCGACCT GGACCCGGCG ACCTCGTTCC CGTACACCCC GGTCCCCGAC CCGGCCCACC CCAAGACCCC GGACTGGCTG AACGACCCCG CGCTCTACCA CAACCGCGGC GACTCGACGT TCAGCGGCGA GTCCAGCCTG CAGGGCGACT TCTCCGGCCT CGACGACCTG ATGACCGAGC ACCCCCGCGT GGTCGCGGGC ATGAAGCAGG TCTTCACCCA CTGGATCGAC ACCCTCGACA TCGACGGCTA CCGGGTCGAC ACCGTCAAGC ACGTCAACAC CGCCTTCTGG CAGGCGCTCG CCCCGTACGT GCGGTCCTAC GCCGCGCAGC GCGGCAAGCC GGACTTCTTC GTCTTCGGCG AGGTCTTCGA CTCCGACCCG GCCACCACCT CGCGCTTCAC CACCGAGGCG GGGCTCCAGT CGGTGCTGGA CTTCCCGTTC CAGTCCGCAG CGCTCGACTT CCTGTCCGGG CGCGGCGCGA CCCGCCTCGG CGACGTCCTG CTCGCCGACG ACCGCTACAC CGACGCCGAC TCCAACGCCT CGTCGCTGCC CACGTTCCTG GGCAACCACG ACCTCGGCCG CGTCGCCCAC CTGCTGCGCC AGAACCGCCC CGACGACACC GACCTGCTCG ACCGCCTCAA GCTCGGCAAC ACCCTGCTCC AGCTGTGGCG CGGCAACCCG GTCGTCTACT ACGGCGACGA GCAGGGCTTC GCGGGGACCG GCGGCGACAA GGACGCCCGC CAGGACCTGT TCGCCAGCGC CACCCCGTCC TACGCCGCCG AACAGCTGAT CGGCACCACG CGGACCGGCG CCGACGACAA CCACGTCCCC GACCACCCGC TGTACCGCCA GCTCGCCGAC CTGGCCCGCT TCACCGACTC CGACCCGGTG TGGCGCGGCG GCAACCAGGT GCTGCGCCGC GCCGAGGGCG ACGTGATCGC GTTCAGCCGC TTCGACCGCC GCGCCCAGGT CGAGCACCTC GTCGTCGCCA ACGCAGGGAC CTCGCCGAGG ACCCTGGACG TGCCGGTCGG CTCGACCGCG CTGCGCCAGG TGTTCCCCAA GCCCGGCCCC ACCGCCAACC GCGACGCCGA CGGCGCGGTC CGGGTCACCG TGCCGCCGCT GTCCGCCCTG GTGCTGCGCG CCACCGGCAA GGCCGTCGCC ACCAAGCCCG CGCCGACCCT GGTCACCCCG GCCGAGGGCA CCGCCCTGGA CGACCGGGTC GAGCTGCGCG CGGACGGGAT CACCGCGCCC TACGCGCAGG CCACGTTCGC CGCCCGCGTC GACGGCAGTC CGGAGTGGAC GGTGCTCGGC ACCGACGACG CCGCCCCGTA CCGGGTGTTC GCCGACCTCG CCGCGCTGCC GGGCGCCGCC GCGGGCACGA GCGTCGAGGT GCGCGTGGTC GCCAAGGACG CGGCCGGGCG GGTGGGCGCG GACGGCGCGC GGGTCGCCCT CGTGCCCGCG CCGCCGACCC CGCAGCCGCC CACCGGGAGC CCGGACTGGC TGGTCGTGCA CTACGCCCGC CAGGACGGCG ACTACACCGG CTGGGGCCTG CACGCCTGGG GCGACGTCGA GTCCGAGCCG ACCTGGCAGG AGCCGCTGCC GTTCGCGGGG CAGACCCCGT ACGGCCGGTT CGCCTGGGTG AAGCTCAAGC CGGGCGCCCG GCAGGTCGGG ATCATCGTGC ACCGGGGCGA CGAGAAGGAC ACCTCGGCCG ACCGGTTCGT CGACCCGTCC ACGTCCCCGC AGGTGTGGCT CGCGCAGGGT GACCCCGCGG TTCACCCGAG CGAGGCCGCC GCCACCGGAC GGGTGCTCGT GCACCACCTC GGCGACACCA CCGGCCGCAC GGTGCGCGCG GGTGCCGCCG AGGTCCCGTT CAGCAACGGC GTCGCCACCC TCCCCGCCAC CGGCCCGGTC GACTTCACCG TGCTGCGCGA CGGGACCGCC GAGGCCACCG GCCGCACCGA CGGTCAGGCG TGGGTGCGCG ACGGCCGGGT GCTCCCCTCG CTCGCGGCGG CCGAGAACCG CGCCGTCCTG CACTACCACC GCCCGGACGG CGACTACGCG GAGTGGACCC TCTACCACTG GACCGGGTCG GCCGAGCCCA GTCCGGGGTG GAACCAGTCC CGACCGCCGG ACGGGGACGA CGGCTTCGGC GTGTACTGGT CGGTGCCGCT GGCGCAGGGC GCGCCGGGCC TGTCCCACAT CATCCACCGC GGCGACGCCA AGGACCCCGG AGCCGACCAG TTCCTCGACG TCACCGGCAC CGGCCACGAG GTGTGGTTCG CCTCGGGCTC GGCGAAGCCG GACGGCTCGG CGTCCTACGT GCTGCCGCCC TCCGGAGGCG ACCCCGTGGA AGACGACCTG ACGAAGTCCA AGGCCGCCTG GGTGCGGAAG GACCTGGTGG TGTGGGACGT GCCCGCGGTC GCCTCGGACG GCTACCGGAT CGAGCACGGC GGCAAGGTCC TGCGCCTGGA GCCCAGCGCC GAGGCGGTGC CGGAGCAGTT CCCGCACCTG CGCGGCAAGC CGGTGTTCCG GGTCCGCGAC GTCGACCGGG TGGACGCGGC GCTGCGCGGC GGCGCGCTGT CCGCCGTGCA CGTCGACGCG GCCGGGACCC TCAGGCACCG CACCGGGGTC CAGCTCGCGG GCGTCCTGGA CGACCGGTTC GCGCCCGCCG CGACCGCGCT CGCCTACGGC CCGGCGTTCG ACGGCGACCG CGTCACCACC CGCCTGTGGG CCCCGACCGC GTCACGGGTG CGGCTGCGCC TGTTCGACGC CCCCGCAGGC GTCCCCGCAG GCGCCCCCGC CGAGGTGCTC GACCTGACCC GCGACGACGC CTCCGGCTCC TGGTCCGGCT CCGGGGACTG GAAGAACCGC TTCTACCAGT ACGAGATCAC CGCCGCGGGC CGCACGGTCG TGGTCACCGA CCCGTACTCG GTCGCGCTCG CGGTCGGCTC CACGCACTCC CAGTTCGCCG ACCTCGCCGA CCCGGCAACC GCCCCGGACG GCTGGTCGAC CGAGGTCGCG CGCGGCTTGG GCGCCAACCC CGTCGAGCAC GGCATCACCG AGCTGCACGT GCGCGACTTC TCCATCGGTG ACGACTCCGT CCCCGAGGCG GACCGGGGCA CCTACCGCGC GTTCACCCAC CGCGACTCCA CCGGCATGAG GCACCTGCGC CAGCTCGCCG AGGCCGGTCT GGACACCGTG CACCTGCTGC CCACCTTCGA CATCGCCACC ATCCCCGAGC GCCGCGCCGA CCAGCGCGCG CCCGACTGCG ACCTGCCGTC CCTGCCGCCG GACTCGCCGC GCCAGCAGGA GTGCGTGGCC GCCACCGCCG CCGACGACGG CTTCAACTGG GGCTACGACC CGCTGCACTA CAACACCCCC GAGGGCTCGT ACGCCACCGA CGCCGCGCAG ACCGGCGCGG CCCGCTCCCG CGAGTACCGC GAGATGGTGC GGTCCTTGCA CGCCAACGGG AACAAGGTCG TGCTCGACGT GGTCTACAAC CACACCGCCG CGTCCGGCGA CGGCCCGAGC TCGGTGCTGG ACAAGGTCGT CCCCGGCTAC CACCACCGGT TCGCCGACGA CGGCTCGATC GCGAACTCCA CCTGCTGCGC CAACACCGCG CCGGAGAACG CCATGACGGG CAAGCTCGTC GTGGACTCGG TGCTGTGGTG GGCCAGGACC TACAAGGTCG ACGGCTTCCG GTTCGACCTC ATGGGCCACC ACCCGAAGGC GAACCTGCTG GCCGTGCGCG CCGCGCTGGA CGCGCTCACC CCCGAGCGCG ACGGCGTCGA CGGGCGGTCG ATCCGGCTCT ACGGCGAGGG CTGGGACTTC GGCGAGGTCG CCGGGAACGC CCGGTTCGAG CAGGCCACCC AGGCGAACCT CGCGGGCACC GGCATCGGCA CGTTCAGCGA CCGGCTGCGC GACGCGGTGC GCGGCGGCGG CCCGTTCGAC GAGGACCCGC GCGTGCAGGG CCTGGGCACC GGGCTCGCGG GCGACCTCAA CGGCTCGCCC GCCAACGGCG ACGTCGCGGC GCGGCTGGCG GGCTACAGCG ACCTGGTGAA GCTGGGCATG GCGGGCAACG CGGCCGGGTT CCGCTTCCGG TCGACCTCCG GTGGCGAGGT CAGCGGCCGG GACGTGCCGT ACAACGGCGC ACCGGCGGGC TACGCGGCCG TCCCGGCGGA CGTGATCAGC TACGTGGACG CGCACGACAA CGAGACCCTG TTCGACGCCC AGGCGTTCAA GCTGCCGCCG TCCACGCCGA TGGCCGACCG GGTCCGGATG CACCGCGTCG CGCTCGCACC CGTCCTGCTC GGCCAGGGGC AGCCGCTGCT GCACGCGGGC AGCGAGTTCC TGCGCTCGAA GTCGCTCGAC CGCAACAGCT ACGACTCGGG CGACTGGTTC AACCGGTACG ACCCGTCGTT GCGGGACAAC GGGTTCGGCC GGGGCCTGCC GCCCGCGCCG GACAACGCCG ACAAGTGGCC CCACTCCGCG CCGCTGCTGG CCGACCCGGC GCTCAAGCCC GCGCCCGAGG ACATGCGGTC CGCGCTGGGG CACACCCTGG AGCTGCTGCG GCTGCGCGGG TCCTCGCCGC TGTTCACCCT GGGCGACGCG GCGCAGGTGC AGGCGAAGCT GTCGTTCCCG GCGGCCGAGC CGGGCGTGGT CGTGGCGCAC CTGGACGACA CCGCCGGTCC CGACCGCGAC CCGGCGCGCG ACGGGCTGCT CGTGGTGGTC AACCCGTTCC CGGTGGAGAA GGAGGTCGCC GCCCCGGTCG ATGGCTGGCG GCAGCACCCG CTGTGCGCCG ACCGCGCGGT GGTCGACGGC ACGTCGGTGC GGGTGCCGCC GAGGTCGGTG GTGGTGCTGG AGCGCTAG
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Protein sequence | MRRSVAALIA LVLVQPAAVT HQAQAQAAPE PGTRLAVGKT TDLPPGARAG DQALAKDALR DAPTGERFYF ALPDRFANGD PSNDRAHTGG DRGQHGFDPT DKGFYHGGDL KGLQQELGYL DDLGTTALWL TPVFRNRWVQ GAGPDASAGY HGYWTTDYTS LDPHFGTTDD MRRLIRDAHR RGIKVFFDIV ANHTADVIDY AEGSHDYVSS KAVPYLDREG NPVDVEELAG SPDFPDLDPA TSFPYTPVPD PAHPKTPDWL NDPALYHNRG DSTFSGESSL QGDFSGLDDL MTEHPRVVAG MKQVFTHWID TLDIDGYRVD TVKHVNTAFW QALAPYVRSY AAQRGKPDFF VFGEVFDSDP ATTSRFTTEA GLQSVLDFPF QSAALDFLSG RGATRLGDVL LADDRYTDAD SNASSLPTFL GNHDLGRVAH LLRQNRPDDT DLLDRLKLGN TLLQLWRGNP VVYYGDEQGF AGTGGDKDAR QDLFASATPS YAAEQLIGTT RTGADDNHVP DHPLYRQLAD LARFTDSDPV WRGGNQVLRR AEGDVIAFSR FDRRAQVEHL VVANAGTSPR TLDVPVGSTA LRQVFPKPGP TANRDADGAV RVTVPPLSAL VLRATGKAVA TKPAPTLVTP AEGTALDDRV ELRADGITAP YAQATFAARV DGSPEWTVLG TDDAAPYRVF ADLAALPGAA AGTSVEVRVV AKDAAGRVGA DGARVALVPA PPTPQPPTGS PDWLVVHYAR QDGDYTGWGL HAWGDVESEP TWQEPLPFAG QTPYGRFAWV KLKPGARQVG IIVHRGDEKD TSADRFVDPS TSPQVWLAQG DPAVHPSEAA ATGRVLVHHL GDTTGRTVRA GAAEVPFSNG VATLPATGPV DFTVLRDGTA EATGRTDGQA WVRDGRVLPS LAAAENRAVL HYHRPDGDYA EWTLYHWTGS AEPSPGWNQS RPPDGDDGFG VYWSVPLAQG APGLSHIIHR GDAKDPGADQ FLDVTGTGHE VWFASGSAKP DGSASYVLPP SGGDPVEDDL TKSKAAWVRK DLVVWDVPAV ASDGYRIEHG GKVLRLEPSA EAVPEQFPHL RGKPVFRVRD VDRVDAALRG GALSAVHVDA AGTLRHRTGV QLAGVLDDRF APAATALAYG PAFDGDRVTT RLWAPTASRV RLRLFDAPAG VPAGAPAEVL DLTRDDASGS WSGSGDWKNR FYQYEITAAG RTVVVTDPYS VALAVGSTHS QFADLADPAT APDGWSTEVA RGLGANPVEH GITELHVRDF SIGDDSVPEA DRGTYRAFTH RDSTGMRHLR QLAEAGLDTV HLLPTFDIAT IPERRADQRA PDCDLPSLPP DSPRQQECVA ATAADDGFNW GYDPLHYNTP EGSYATDAAQ TGAARSREYR EMVRSLHANG NKVVLDVVYN HTAASGDGPS SVLDKVVPGY HHRFADDGSI ANSTCCANTA PENAMTGKLV VDSVLWWART YKVDGFRFDL MGHHPKANLL AVRAALDALT PERDGVDGRS IRLYGEGWDF GEVAGNARFE QATQANLAGT GIGTFSDRLR DAVRGGGPFD EDPRVQGLGT GLAGDLNGSP ANGDVAARLA GYSDLVKLGM AGNAAGFRFR STSGGEVSGR DVPYNGAPAG YAAVPADVIS YVDAHDNETL FDAQAFKLPP STPMADRVRM HRVALAPVLL GQGQPLLHAG SEFLRSKSLD RNSYDSGDWF NRYDPSLRDN GFGRGLPPAP DNADKWPHSA PLLADPALKP APEDMRSALG HTLELLRLRG SSPLFTLGDA AQVQAKLSFP AAEPGVVVAH LDDTAGPDRD PARDGLLVVV NPFPVEKEVA APVDGWRQHP LCADRAVVDG TSVRVPPRSV VVLER
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