| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1170 |
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| Symbol | |
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| ID | 8325347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1303945 |
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| End bp | 1309512 |
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| Gene Length | 5568 bp |
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| Protein Length | 1855 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644941717 |
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| Product | alpha-1,6-glucosidase, pullulanase-type |
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| Protein accession | YP_003098970 |
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| Protein GI | 256375310 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02103] alpha-1,6-glucosidases, pullulanase-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTCGGT CCGTCGCCGC GCTCATCGCG CTGGTCCTCG TCCAGCCCGC AGCCGTCACC
CACCAGGCCC AGGCGCAAGC GGCCCCGGAA CCGGGAACCC GTTTAGCCGT CGGCAAGACC
ACCGACCTCC CGCCGGGCGC CCGAGCCGGG GACCAGGCCC TCGCCAAGGA CGCCCTCCGC
GACGCCCCCA CCGGCGAGCG CTTCTACTTC GCCCTCCCCG ACCGCTTCGC CAACGGCGAC
CCGTCGAACG ACCGCGCCCA CACCGGCGGC GACCGCGGGC AGCACGGCTT CGACCCCACC
GACAAGGGCT TCTACCACGG CGGCGACCTC AAGGGCCTTC AGCAGGAGCT CGGCTACCTC
GACGACCTCG GCACCACCGC CCTCTGGCTC ACCCCGGTCT TCCGCAACCG CTGGGTCCAG
GGCGCCGGTC CCGACGCGTC CGCCGGCTAC CACGGCTACT GGACCACCGA CTACACCTCG
CTCGACCCGC ACTTCGGCAC CACCGACGAC ATGCGCCGCC TCATCCGCGA CGCGCACCGC
CGGGGCATCA AGGTCTTCTT CGACATCGTC GCCAACCACA CCGCCGACGT CATCGACTAC
GCCGAGGGCT CCCACGACTA CGTCAGCTCG AAGGCCGTCC CGTACCTGGA CCGCGAGGGC
AACCCGGTCG ACGTCGAGGA GCTCGCGGGC AGCCCGGACT TCCCCGACCT GGACCCGGCG
ACCTCGTTCC CGTACACCCC GGTCCCCGAC CCGGCCCACC CCAAGACCCC GGACTGGCTG
AACGACCCCG CGCTCTACCA CAACCGCGGC GACTCGACGT TCAGCGGCGA GTCCAGCCTG
CAGGGCGACT TCTCCGGCCT CGACGACCTG ATGACCGAGC ACCCCCGCGT GGTCGCGGGC
ATGAAGCAGG TCTTCACCCA CTGGATCGAC ACCCTCGACA TCGACGGCTA CCGGGTCGAC
ACCGTCAAGC ACGTCAACAC CGCCTTCTGG CAGGCGCTCG CCCCGTACGT GCGGTCCTAC
GCCGCGCAGC GCGGCAAGCC GGACTTCTTC GTCTTCGGCG AGGTCTTCGA CTCCGACCCG
GCCACCACCT CGCGCTTCAC CACCGAGGCG GGGCTCCAGT CGGTGCTGGA CTTCCCGTTC
CAGTCCGCAG CGCTCGACTT CCTGTCCGGG CGCGGCGCGA CCCGCCTCGG CGACGTCCTG
CTCGCCGACG ACCGCTACAC CGACGCCGAC TCCAACGCCT CGTCGCTGCC CACGTTCCTG
GGCAACCACG ACCTCGGCCG CGTCGCCCAC CTGCTGCGCC AGAACCGCCC CGACGACACC
GACCTGCTCG ACCGCCTCAA GCTCGGCAAC ACCCTGCTCC AGCTGTGGCG CGGCAACCCG
GTCGTCTACT ACGGCGACGA GCAGGGCTTC GCGGGGACCG GCGGCGACAA GGACGCCCGC
CAGGACCTGT TCGCCAGCGC CACCCCGTCC TACGCCGCCG AACAGCTGAT CGGCACCACG
CGGACCGGCG CCGACGACAA CCACGTCCCC GACCACCCGC TGTACCGCCA GCTCGCCGAC
CTGGCCCGCT TCACCGACTC CGACCCGGTG TGGCGCGGCG GCAACCAGGT GCTGCGCCGC
GCCGAGGGCG ACGTGATCGC GTTCAGCCGC TTCGACCGCC GCGCCCAGGT CGAGCACCTC
GTCGTCGCCA ACGCAGGGAC CTCGCCGAGG ACCCTGGACG TGCCGGTCGG CTCGACCGCG
CTGCGCCAGG TGTTCCCCAA GCCCGGCCCC ACCGCCAACC GCGACGCCGA CGGCGCGGTC
CGGGTCACCG TGCCGCCGCT GTCCGCCCTG GTGCTGCGCG CCACCGGCAA GGCCGTCGCC
ACCAAGCCCG CGCCGACCCT GGTCACCCCG GCCGAGGGCA CCGCCCTGGA CGACCGGGTC
GAGCTGCGCG CGGACGGGAT CACCGCGCCC TACGCGCAGG CCACGTTCGC CGCCCGCGTC
GACGGCAGTC CGGAGTGGAC GGTGCTCGGC ACCGACGACG CCGCCCCGTA CCGGGTGTTC
GCCGACCTCG CCGCGCTGCC GGGCGCCGCC GCGGGCACGA GCGTCGAGGT GCGCGTGGTC
GCCAAGGACG CGGCCGGGCG GGTGGGCGCG GACGGCGCGC GGGTCGCCCT CGTGCCCGCG
CCGCCGACCC CGCAGCCGCC CACCGGGAGC CCGGACTGGC TGGTCGTGCA CTACGCCCGC
CAGGACGGCG ACTACACCGG CTGGGGCCTG CACGCCTGGG GCGACGTCGA GTCCGAGCCG
ACCTGGCAGG AGCCGCTGCC GTTCGCGGGG CAGACCCCGT ACGGCCGGTT CGCCTGGGTG
AAGCTCAAGC CGGGCGCCCG GCAGGTCGGG ATCATCGTGC ACCGGGGCGA CGAGAAGGAC
ACCTCGGCCG ACCGGTTCGT CGACCCGTCC ACGTCCCCGC AGGTGTGGCT CGCGCAGGGT
GACCCCGCGG TTCACCCGAG CGAGGCCGCC GCCACCGGAC GGGTGCTCGT GCACCACCTC
GGCGACACCA CCGGCCGCAC GGTGCGCGCG GGTGCCGCCG AGGTCCCGTT CAGCAACGGC
GTCGCCACCC TCCCCGCCAC CGGCCCGGTC GACTTCACCG TGCTGCGCGA CGGGACCGCC
GAGGCCACCG GCCGCACCGA CGGTCAGGCG TGGGTGCGCG ACGGCCGGGT GCTCCCCTCG
CTCGCGGCGG CCGAGAACCG CGCCGTCCTG CACTACCACC GCCCGGACGG CGACTACGCG
GAGTGGACCC TCTACCACTG GACCGGGTCG GCCGAGCCCA GTCCGGGGTG GAACCAGTCC
CGACCGCCGG ACGGGGACGA CGGCTTCGGC GTGTACTGGT CGGTGCCGCT GGCGCAGGGC
GCGCCGGGCC TGTCCCACAT CATCCACCGC GGCGACGCCA AGGACCCCGG AGCCGACCAG
TTCCTCGACG TCACCGGCAC CGGCCACGAG GTGTGGTTCG CCTCGGGCTC GGCGAAGCCG
GACGGCTCGG CGTCCTACGT GCTGCCGCCC TCCGGAGGCG ACCCCGTGGA AGACGACCTG
ACGAAGTCCA AGGCCGCCTG GGTGCGGAAG GACCTGGTGG TGTGGGACGT GCCCGCGGTC
GCCTCGGACG GCTACCGGAT CGAGCACGGC GGCAAGGTCC TGCGCCTGGA GCCCAGCGCC
GAGGCGGTGC CGGAGCAGTT CCCGCACCTG CGCGGCAAGC CGGTGTTCCG GGTCCGCGAC
GTCGACCGGG TGGACGCGGC GCTGCGCGGC GGCGCGCTGT CCGCCGTGCA CGTCGACGCG
GCCGGGACCC TCAGGCACCG CACCGGGGTC CAGCTCGCGG GCGTCCTGGA CGACCGGTTC
GCGCCCGCCG CGACCGCGCT CGCCTACGGC CCGGCGTTCG ACGGCGACCG CGTCACCACC
CGCCTGTGGG CCCCGACCGC GTCACGGGTG CGGCTGCGCC TGTTCGACGC CCCCGCAGGC
GTCCCCGCAG GCGCCCCCGC CGAGGTGCTC GACCTGACCC GCGACGACGC CTCCGGCTCC
TGGTCCGGCT CCGGGGACTG GAAGAACCGC TTCTACCAGT ACGAGATCAC CGCCGCGGGC
CGCACGGTCG TGGTCACCGA CCCGTACTCG GTCGCGCTCG CGGTCGGCTC CACGCACTCC
CAGTTCGCCG ACCTCGCCGA CCCGGCAACC GCCCCGGACG GCTGGTCGAC CGAGGTCGCG
CGCGGCTTGG GCGCCAACCC CGTCGAGCAC GGCATCACCG AGCTGCACGT GCGCGACTTC
TCCATCGGTG ACGACTCCGT CCCCGAGGCG GACCGGGGCA CCTACCGCGC GTTCACCCAC
CGCGACTCCA CCGGCATGAG GCACCTGCGC CAGCTCGCCG AGGCCGGTCT GGACACCGTG
CACCTGCTGC CCACCTTCGA CATCGCCACC ATCCCCGAGC GCCGCGCCGA CCAGCGCGCG
CCCGACTGCG ACCTGCCGTC CCTGCCGCCG GACTCGCCGC GCCAGCAGGA GTGCGTGGCC
GCCACCGCCG CCGACGACGG CTTCAACTGG GGCTACGACC CGCTGCACTA CAACACCCCC
GAGGGCTCGT ACGCCACCGA CGCCGCGCAG ACCGGCGCGG CCCGCTCCCG CGAGTACCGC
GAGATGGTGC GGTCCTTGCA CGCCAACGGG AACAAGGTCG TGCTCGACGT GGTCTACAAC
CACACCGCCG CGTCCGGCGA CGGCCCGAGC TCGGTGCTGG ACAAGGTCGT CCCCGGCTAC
CACCACCGGT TCGCCGACGA CGGCTCGATC GCGAACTCCA CCTGCTGCGC CAACACCGCG
CCGGAGAACG CCATGACGGG CAAGCTCGTC GTGGACTCGG TGCTGTGGTG GGCCAGGACC
TACAAGGTCG ACGGCTTCCG GTTCGACCTC ATGGGCCACC ACCCGAAGGC GAACCTGCTG
GCCGTGCGCG CCGCGCTGGA CGCGCTCACC CCCGAGCGCG ACGGCGTCGA CGGGCGGTCG
ATCCGGCTCT ACGGCGAGGG CTGGGACTTC GGCGAGGTCG CCGGGAACGC CCGGTTCGAG
CAGGCCACCC AGGCGAACCT CGCGGGCACC GGCATCGGCA CGTTCAGCGA CCGGCTGCGC
GACGCGGTGC GCGGCGGCGG CCCGTTCGAC GAGGACCCGC GCGTGCAGGG CCTGGGCACC
GGGCTCGCGG GCGACCTCAA CGGCTCGCCC GCCAACGGCG ACGTCGCGGC GCGGCTGGCG
GGCTACAGCG ACCTGGTGAA GCTGGGCATG GCGGGCAACG CGGCCGGGTT CCGCTTCCGG
TCGACCTCCG GTGGCGAGGT CAGCGGCCGG GACGTGCCGT ACAACGGCGC ACCGGCGGGC
TACGCGGCCG TCCCGGCGGA CGTGATCAGC TACGTGGACG CGCACGACAA CGAGACCCTG
TTCGACGCCC AGGCGTTCAA GCTGCCGCCG TCCACGCCGA TGGCCGACCG GGTCCGGATG
CACCGCGTCG CGCTCGCACC CGTCCTGCTC GGCCAGGGGC AGCCGCTGCT GCACGCGGGC
AGCGAGTTCC TGCGCTCGAA GTCGCTCGAC CGCAACAGCT ACGACTCGGG CGACTGGTTC
AACCGGTACG ACCCGTCGTT GCGGGACAAC GGGTTCGGCC GGGGCCTGCC GCCCGCGCCG
GACAACGCCG ACAAGTGGCC CCACTCCGCG CCGCTGCTGG CCGACCCGGC GCTCAAGCCC
GCGCCCGAGG ACATGCGGTC CGCGCTGGGG CACACCCTGG AGCTGCTGCG GCTGCGCGGG
TCCTCGCCGC TGTTCACCCT GGGCGACGCG GCGCAGGTGC AGGCGAAGCT GTCGTTCCCG
GCGGCCGAGC CGGGCGTGGT CGTGGCGCAC CTGGACGACA CCGCCGGTCC CGACCGCGAC
CCGGCGCGCG ACGGGCTGCT CGTGGTGGTC AACCCGTTCC CGGTGGAGAA GGAGGTCGCC
GCCCCGGTCG ATGGCTGGCG GCAGCACCCG CTGTGCGCCG ACCGCGCGGT GGTCGACGGC
ACGTCGGTGC GGGTGCCGCC GAGGTCGGTG GTGGTGCTGG AGCGCTAG
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| Protein sequence | MRRSVAALIA LVLVQPAAVT HQAQAQAAPE PGTRLAVGKT TDLPPGARAG DQALAKDALR
DAPTGERFYF ALPDRFANGD PSNDRAHTGG DRGQHGFDPT DKGFYHGGDL KGLQQELGYL
DDLGTTALWL TPVFRNRWVQ GAGPDASAGY HGYWTTDYTS LDPHFGTTDD MRRLIRDAHR
RGIKVFFDIV ANHTADVIDY AEGSHDYVSS KAVPYLDREG NPVDVEELAG SPDFPDLDPA
TSFPYTPVPD PAHPKTPDWL NDPALYHNRG DSTFSGESSL QGDFSGLDDL MTEHPRVVAG
MKQVFTHWID TLDIDGYRVD TVKHVNTAFW QALAPYVRSY AAQRGKPDFF VFGEVFDSDP
ATTSRFTTEA GLQSVLDFPF QSAALDFLSG RGATRLGDVL LADDRYTDAD SNASSLPTFL
GNHDLGRVAH LLRQNRPDDT DLLDRLKLGN TLLQLWRGNP VVYYGDEQGF AGTGGDKDAR
QDLFASATPS YAAEQLIGTT RTGADDNHVP DHPLYRQLAD LARFTDSDPV WRGGNQVLRR
AEGDVIAFSR FDRRAQVEHL VVANAGTSPR TLDVPVGSTA LRQVFPKPGP TANRDADGAV
RVTVPPLSAL VLRATGKAVA TKPAPTLVTP AEGTALDDRV ELRADGITAP YAQATFAARV
DGSPEWTVLG TDDAAPYRVF ADLAALPGAA AGTSVEVRVV AKDAAGRVGA DGARVALVPA
PPTPQPPTGS PDWLVVHYAR QDGDYTGWGL HAWGDVESEP TWQEPLPFAG QTPYGRFAWV
KLKPGARQVG IIVHRGDEKD TSADRFVDPS TSPQVWLAQG DPAVHPSEAA ATGRVLVHHL
GDTTGRTVRA GAAEVPFSNG VATLPATGPV DFTVLRDGTA EATGRTDGQA WVRDGRVLPS
LAAAENRAVL HYHRPDGDYA EWTLYHWTGS AEPSPGWNQS RPPDGDDGFG VYWSVPLAQG
APGLSHIIHR GDAKDPGADQ FLDVTGTGHE VWFASGSAKP DGSASYVLPP SGGDPVEDDL
TKSKAAWVRK DLVVWDVPAV ASDGYRIEHG GKVLRLEPSA EAVPEQFPHL RGKPVFRVRD
VDRVDAALRG GALSAVHVDA AGTLRHRTGV QLAGVLDDRF APAATALAYG PAFDGDRVTT
RLWAPTASRV RLRLFDAPAG VPAGAPAEVL DLTRDDASGS WSGSGDWKNR FYQYEITAAG
RTVVVTDPYS VALAVGSTHS QFADLADPAT APDGWSTEVA RGLGANPVEH GITELHVRDF
SIGDDSVPEA DRGTYRAFTH RDSTGMRHLR QLAEAGLDTV HLLPTFDIAT IPERRADQRA
PDCDLPSLPP DSPRQQECVA ATAADDGFNW GYDPLHYNTP EGSYATDAAQ TGAARSREYR
EMVRSLHANG NKVVLDVVYN HTAASGDGPS SVLDKVVPGY HHRFADDGSI ANSTCCANTA
PENAMTGKLV VDSVLWWART YKVDGFRFDL MGHHPKANLL AVRAALDALT PERDGVDGRS
IRLYGEGWDF GEVAGNARFE QATQANLAGT GIGTFSDRLR DAVRGGGPFD EDPRVQGLGT
GLAGDLNGSP ANGDVAARLA GYSDLVKLGM AGNAAGFRFR STSGGEVSGR DVPYNGAPAG
YAAVPADVIS YVDAHDNETL FDAQAFKLPP STPMADRVRM HRVALAPVLL GQGQPLLHAG
SEFLRSKSLD RNSYDSGDWF NRYDPSLRDN GFGRGLPPAP DNADKWPHSA PLLADPALKP
APEDMRSALG HTLELLRLRG SSPLFTLGDA AQVQAKLSFP AAEPGVVVAH LDDTAGPDRD
PARDGLLVVV NPFPVEKEVA APVDGWRQHP LCADRAVVDG TSVRVPPRSV VVLER
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