Gene Amir_1122 details

Gene Information

• Locus tag: Amir_1122
• ID: 8325297
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 1241312
• End bp: 1243375
• Gene Length: 2064 bp
• Protein Length: 687 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 644941668
• Product: copper resistance D domain protein
• Protein accession: YP_003098923
• Protein GI: 256375263
• COG category: [S] Function unknown
• COG ID: [COG3336] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCCCCCA CCGAGGTCCG CTCCAGCGCC CGCCCCGCCC GCACCGGGCT GATCCCCCTG 
CTGGCCGTCG GCGTCGCGGT CGCGGCGCTG CTGGCCGCCG GGCTCGTGGG CGGTCCGGCC 
GCCGGGCTCG TGGTGGTCAG GGTGGTCACC GAGAGCGCGG CGGTGCTGAC GATCGGCTCG 
CTGCTGCTCG CGGCGTTCCT GGTGCCGCCG CAGGAGTCCG GCACGCTCGC CGCCGACGGT 
TACGCCGCGT TGCGGACCGC CGCGTGGGCC TCACTCGTGT GGACGGCGGG CGCGGTGCTG 
TCGGTGCCCT ACACGGTGGC GGACGCGCTC GGGCAACCGC TGTCCGCGCT GCTCGACCTC 
TCGGTGCTGT TCGAGGTCGT GGACGTGGTG GAGCAGAGCC GGGCGTGGAT GGTGACCGCC 
GTCATCGTCG TGCTGCTCGC CCTCGGCTGC CGCCTGGTGC TGTCCTGGGG CTGGACCACC 
GTGCTGTTCT TCGTGTCGGT GTTCGCGCTG GTCCCCGTCG CGGTGACCGG GCACTCCTCG 
GGCGGCGGCT CGCACGACGT CGCCACCAAC AGCCTGCTGT ACCACCTGGT CGCCGCCGCG 
CTGTGGGTCG GCGGGCTGAT CGCGCTGCTC GCGCACGGCC GCAGGCGCGG GGCGCACCTG 
GGCCTTGCCG CGTCCCGGTT CTCCTCGATC GCGCTGGTCT GCTGGATCGT CATGGCGGTC 
TCCGGCGTGG TCAACGCGTA CGTGCGGCTG CCGCTGGACC AGCTCCTCAC CTCCGAGTAC 
GGCCTGCTCG TGCTGGGCAA GACCGCCGCG CTGCTCGCGC TGGGCGTGTT CGGCTACCTC 
CAGCGCGCCA AGGGCGTCAA GCAGGTCGTG GCCACCGGCT CCGGTCGCGC GCTGGTGCGG 
CTGGCGGGCG TCGAGGTGCT GCTGATGCTC GCCACGATCG GCCTCGCCGC CGCGCTCAGC 
CGCACGCCCC CGCCCACCGA GGGGCGCACC CTGCCGAGCC CGGTGGAGCT GCGCATCGGC 
TACGACCTGG CGGGCGAGCC GACGCTCTAC CGCATCCTGT TCGACTGGCG CTTCGACCTC 
GTCTACGGCA CCACGTTCCT CGCCGCCGCC GTCGTCTACC TGCTGGGCGT GCGCCGGTTG 
CGCAAGCGCG GCGACGCCTG GCCGGTGGGC CGCACGATCG CGTGGGTGCT GGGCTGCCTG 
ACCGTGGTGT TCGCGACCTC GTCGGGCCTC GGCCGCTACT CGCCCGCGAT GTTCAGCGTC 
CACATGCAGG CGCACATGCT GCTGGCCATG CTCGCGCCGA TCCTGCTGGT GCTGGGCGCC 
CCGGTGACGA TGGCGCTGCG CGCCCTGCCG GTCGCGGGCC GGGGCAACCC GCCGGGGCCG 
CGCGAGTGGG TGCTGGCGCT GGTGCACTCG CCGGTGGCGA AGGTGCTGAC CAACCCGTTC 
GTGGCACTGG CGTTCTTCGT CGGGTCGTTC TACGGGCTGT ACTTCTCCGG GCTGTACGAC 
GTGGCGCTGG ACCACCACTG GGCGCACCTG GCGATGAACG CGCACTTCCT GATGGCCGGG 
TACGTCTTCT ACTGGCCGGT GATCGGGGTC GACCCCGCGC CGAACAAGCT GCCGCCGCTG 
GGGAAGCTGG GGCTGCTGTT CGCCTCGCTC CCGTTCCACG CGTTCTTCGG CGTGGTGCTG 
ATGAGCGCGC AGTACGTGAT CGGCAGCGAC TTCTACCGCA AGCTCTCGCT GCCGTGGGTG 
CCGTCGCTGC TGGAGGACCA GCGGCTCGGC GGCGGCATCG CGTGGGCGGC GGGGGAGCTC 
CCGCTGCTGG TGGTGATGGT CGCGCTGCTC GCGCAGTGGG CCCGCTCCGA CAGCCGGGAC 
GCCAAGCGCG CGGACCGGAA GGCGGACGCG GACGGCGGCG CGGACCTCGC GGCGTACAAC 
GAGATGCTGC GCAGGATGGC GGGGAAGGGC GGGTCGGTGG CCGTGGCCGA GCCGAAGGCC 
GATACCGAGA CCGGGAACGC CGGACCCGGC GCCGCGAAGC CGAAGCCGGG CACCGGGGGA 
GCGGGCGGAC CTGGCGAGGG CTGA 

 

Protein sequence

MSPTEVRSSA RPARTGLIPL LAVGVAVAAL LAAGLVGGPA AGLVVVRVVT ESAAVLTIGS 
LLLAAFLVPP QESGTLAADG YAALRTAAWA SLVWTAGAVL SVPYTVADAL GQPLSALLDL 
SVLFEVVDVV EQSRAWMVTA VIVVLLALGC RLVLSWGWTT VLFFVSVFAL VPVAVTGHSS 
GGGSHDVATN SLLYHLVAAA LWVGGLIALL AHGRRRGAHL GLAASRFSSI ALVCWIVMAV 
SGVVNAYVRL PLDQLLTSEY GLLVLGKTAA LLALGVFGYL QRAKGVKQVV ATGSGRALVR 
LAGVEVLLML ATIGLAAALS RTPPPTEGRT LPSPVELRIG YDLAGEPTLY RILFDWRFDL 
VYGTTFLAAA VVYLLGVRRL RKRGDAWPVG RTIAWVLGCL TVVFATSSGL GRYSPAMFSV 
HMQAHMLLAM LAPILLVLGA PVTMALRALP VAGRGNPPGP REWVLALVHS PVAKVLTNPF 
VALAFFVGSF YGLYFSGLYD VALDHHWAHL AMNAHFLMAG YVFYWPVIGV DPAPNKLPPL 
GKLGLLFASL PFHAFFGVVL MSAQYVIGSD FYRKLSLPWV PSLLEDQRLG GGIAWAAGEL 
PLLVVMVALL AQWARSDSRD AKRADRKADA DGGADLAAYN EMLRRMAGKG GSVAVAEPKA 
DTETGNAGPG AAKPKPGTGG AGGPGEG