| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1089 |
|---|
| Symbol | |
|---|
| ID | 8325263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 1210449 |
|---|
| End bp | 1211972 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644941635 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_003098891 |
|---|
| Protein GI | 256375231 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.305078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGT ACGCGGCACC GGGGCAACCG GACAGCGTGG TGAGCTACCG GAGCAGGTAC
GACCACTTCA TCGGCGGCGA GTTCACCGCC CCGGCGAAGG GCGGCTACTT CGAGAACCCC
ACCCCGGTCA CCGGTGAGAC GTTCACCGAG GTCGCCAGGG GCACGGCCGA GGACGTCGAG
CGCGCCCTCG ACGCCGCCCA CGGCGCCGCG CCCGCGTGGG GCCGCACCTC GCCCGCCGAG
CGCGCCAACG TCCTCAACAA GATCGCGGAC CGGATCGAGG CCAACCTGGA GGCCCTCGCC
GTCGCCGAGA CCTGGGACAA CGGCAAGGCG GTGCGCGAGA CGCTGGCGGC CGACCTGCCG
CTGGCCGTCG ACCACTTCCG CTACTTCGCG GGCGCCCTGC GCGCCCAGGA GGGCGGCATC
TCGCAGATCG ACGAGAACCT CGTCGCCTAC CACTTCCACG AGCCGCTCGG CGTGGTCGGC
CAGATCATCC CGTGGAACTT CCCGATCCTG ATGGCCGTGT GGAAGCTCGC CCCCGCGCTC
GCGGCGGGCA ACGCGGTCGT GCTCAAGCCC GCCGAGCAGA CCCCCGCGTC GATCATGGTG
CTGGTCGAGC TGATCGCCGA CCTGCTGCCG CCGGGCGTGC TGAACGTGGT CAACGGCTTC
GGCGTGGAGG CGGGCAAGCC GCTGGCCACC AGCAAGCGCG TCGCGAAGGT CGCGTTCACC
GGTGAGACCA CCACCGGCAG GCTGATCATG CAGTACGCCA GCGAGAACAT CATCCCGGTC
ACCCTGGAGC TGGGCGGCAA GAGCCCGAAC ATCTTCTTCG GCGACGTGGC GGCCCAGCGC
GACGAGTTCT ACGACAAGGC CCTCGAGGGC TTCACGATGT TCGCGCTCAA CCAGGGCGAG
GTGTGCACCT GCCCGTCCCG CGCGCTGATC CAGGGCTCGA TCTACGAGCA GTTCCTCGGC
GACGCGGTCG AGCGCACCAA GGCGGTCAAG CAGGGCCACC CGCTCGACAC CGACACGATG
ATCGGCGCGC AGGCCAGCAA CGACCAGCTG GAGAAGATCC TCGCCTACAT CGAGATCGGC
AAGGCCGAGG GCGCCACGCT GCTCACCGGC GGCGGTCGCG CGGACCTGGG CGGCGAGCTG
TCCGGCGGCT ACTACGTCAC CCCGACCGTG TTCGAGGGCG ACAACAAGAT GCGGATCTTC
CAGGAGGAGA TCTTCGGCCC GGTCGTGTCG GTCGCCCGCT TCGACGACTA CGCCGACGCC
ATCAAGATCG CCAACGACAC GCTGTACGGC CTCGGCGCGG GCGTCTGGTC CCGCGACGGG
TCCACCGCCT ACCGCGCGGG CCGCGAGATC CAGGCGGGCC GGGTGTGGGT GAACAACTAC
CACACCTACC CGGCGCACGC GGCGTTCGGC GGCTACAAGC AGTCCGGCAT CGGCCGCGAG
AACCACCGGA TGATGCTCGA CCACTACCAG CAGACCAAGA ACCTGCTGGT CAGCTACGCC
CCCGGCGCGC AGGGCTTCTT CTGA
|
|---|
| Protein sequence | MAKYAAPGQP DSVVSYRSRY DHFIGGEFTA PAKGGYFENP TPVTGETFTE VARGTAEDVE
RALDAAHGAA PAWGRTSPAE RANVLNKIAD RIEANLEALA VAETWDNGKA VRETLAADLP
LAVDHFRYFA GALRAQEGGI SQIDENLVAY HFHEPLGVVG QIIPWNFPIL MAVWKLAPAL
AAGNAVVLKP AEQTPASIMV LVELIADLLP PGVLNVVNGF GVEAGKPLAT SKRVAKVAFT
GETTTGRLIM QYASENIIPV TLELGGKSPN IFFGDVAAQR DEFYDKALEG FTMFALNQGE
VCTCPSRALI QGSIYEQFLG DAVERTKAVK QGHPLDTDTM IGAQASNDQL EKILAYIEIG
KAEGATLLTG GGRADLGGEL SGGYYVTPTV FEGDNKMRIF QEEIFGPVVS VARFDDYADA
IKIANDTLYG LGAGVWSRDG STAYRAGREI QAGRVWVNNY HTYPAHAAFG GYKQSGIGRE
NHRMMLDHYQ QTKNLLVSYA PGAQGFF
|
|---|
| |