Gene Amir_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1080 
Symbol 
ID8325254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1201368 
End bp1202015 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content77% 
IMG OID644941626 
ProductMethyltransferase type 11 
Protein accessionYP_003098882 
Protein GI256375222 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTCC ACCCCGGACC GGCCCCCGAC CCGGCCGTGA TCGCGCGGCC GTTCGACGCG 
CTCGGCGCGG ACTACGAGCG GGCCTTCGCG GACCTGCCCG AGCAGCTGGC CGCGCTCGAC
TGGTTGTTGG CCGGGCTGCC CGAGGGCGCG CGGGTGCTCG ACGTCGGCTC CGGCACCGGG
AGGCCGACCG CCGAGCGGCT GGTGGCGGCG GGGCACCGGG TGACCGGCTG CGACGTGTCG
GCGACCATGG TCGAGCTGGC CCGCGAGCGG GTGCCGGGGG CGCGGTTCGA GCTGGTGGAC
GTGCGCGACC TGCCCGCCGC GCCCGCCTCG CTGGACGCGG TCACCGCGTT CTTCCCGCTG
CTCCAGCTGC CCCGCGCCGA CCAGGCACGG GTGCTGGCCG ACCTGGCCGA CCGCCTGGTC
CCCGGCGGTC TGCTCGCCGT GGCGACCGTG CCCGCCGACG TCGAGGACGT CGACCTGCTC
TGGCTGGGCC AACCGGTGCG CTGCACGAGC TTCCCGGCGC CCGCGTTCCG CGCGCTGGTC
GAGTCCACCG GGTTGCGCGT CGAGCACGAG CGGCACGGCG CGTTCACCCC GCACTTCCCG
GACGCCGTCC CGGAGGAGCA CCTGTTCCTG CTGGCCCGCA AGCCGTGA
 
Protein sequence
MTVHPGPAPD PAVIARPFDA LGADYERAFA DLPEQLAALD WLLAGLPEGA RVLDVGSGTG 
RPTAERLVAA GHRVTGCDVS ATMVELARER VPGARFELVD VRDLPAAPAS LDAVTAFFPL
LQLPRADQAR VLADLADRLV PGGLLAVATV PADVEDVDLL WLGQPVRCTS FPAPAFRALV
ESTGLRVEHE RHGAFTPHFP DAVPEEHLFL LARKP