Gene Amir_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1015 
Symbol 
ID8325186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1127719 
End bp1128513 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content73% 
IMG OID644941558 
Productglutamate racemase 
Protein accessionYP_003098817 
Protein GI256375157 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTTCCG CCGACGCGCC GATCGGGATC TTCGACTCCG GTGTGGGCGG GCTGACCGTC 
GCGCGAGCGA TCATGGACCA GCTCCCCGCC GAACGCATCC GCTACGTGGG CGACACCGCC
AACGGCCCCT ACGGCCCGCT GCCGATCGCC CAGGTGCGCA AGCACGCGCT CGACCTCGCC
GACAAGCTCG TCGCGGACGG CGTCAAGATG CTCGTGATCG CGTGCAACAC CGCGTCCGCC
GCGTGCCTGC GCGACGCGCG CGAGCGCTAC GACGTGCCCG TGGTCGAGGT CGTGCTGCCC
GCCGTGCGCC GCGCCGTCGC CACCACCCGC AGCGGCCGGG TCGGCGTCAT CGGCACCCAG
AGCACCATCA CCTCCGGCGC CTACCAGGAC ACCTTCGCCG CCGCGCGCGA CGTCCAGGTC
ACCGCCGTCG CCTGCCCCCG GTTCGTGGAC TTCGTGGAGC GCGGCACCAC CTCCGGCCGC
CAGGTCCTCG GCATCGCCCA GGCCTACCTG GAGCCGCTGC AGCGCGCCGA CGTCGACACG
CTCGTCCTCG GCTGCACGCA CTACCCGCTG CTCACCGGCG TCGTCCAGCT CGTCATGGGC
GACGGCGTCA CCCTGGTCTC CAGCGCGGAG GAGACGGTCA AGGACGTGGT GCGGGTGCTG
ACCGAGCGCG ACCAGTTCCG CGAGGGCGAG CCCGACCAGC GGTTCACCTC CACCGGCTCG
GTCGAGACCT TCGAACGGCT CGCCCGCAGG TTCCTGCCGC AGTTGGCGCA CGCCTCCTTC
CACGCGTACG GCTGA
 
Protein sequence
MTSADAPIGI FDSGVGGLTV ARAIMDQLPA ERIRYVGDTA NGPYGPLPIA QVRKHALDLA 
DKLVADGVKM LVIACNTASA ACLRDARERY DVPVVEVVLP AVRRAVATTR SGRVGVIGTQ
STITSGAYQD TFAAARDVQV TAVACPRFVD FVERGTTSGR QVLGIAQAYL EPLQRADVDT
LVLGCTHYPL LTGVVQLVMG DGVTLVSSAE ETVKDVVRVL TERDQFREGE PDQRFTSTGS
VETFERLARR FLPQLAHASF HAYG