Gene Amir_0995 details

Gene Information

• Locus tag: Amir_0995
• ID: 8325166
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 1110535
• End bp: 1112580
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 644941538
• Product: helicase c2
• Protein accession: YP_003098797
• Protein GI: 256375137
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG1199] Rad3-related DNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.900844
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCCCCCG CCATCACCAC CGTCCCCGAC ACCCGCGCGC TCCTGGCCAT CGCCGTGAAG 
GCCGTGGGCG GAGCCGAGCG CGAGGGGCAG GTGGACATGG CGCTCGCCGT CGAGCGGTCC 
ATCCGCACCG GCGAGCACCT CGCCGTCCAG GCGGGCACCG GCACCGGCAA GTCGCTGGCC 
TACCTGGTCC CCGCGCTGCG GCACGCCGTC GCCGAGGAGA GCACCGTCGT CATCTCGACC 
GCGACGATCG CCCTGCAGCG CCAGCTCGTG GACCGGGACC TGCCGCGCCT GGCGAAGGCG 
CTGCGCAAGG AGCTGGGCCG GGAGCCGCGC TTCGCGATCC TCAAGGGCAG GCGCAACTAC 
CTCTGCATGC ACCGCCTGCA CAGCGGCGCC CCGGACGAGC CCGAGGACGC CGCGCTGTTC 
GACCCGTTCG CGGTGTCCAA GCTCGGCCGC GAGGTGAAGC GGCTGCACGA GTGGTCCTCC 
GACACCGAGA CCGGCGACCG GGACGAGCTG GTGCCGGGCG TGCCCGACCA GGCGTGGAAG 
CAGGTGTCGG TCACCGCGCG CGAGTGCCTC GGCGTGAGCA AGTGCCCCAT CGGCACGGAC 
TGCTTCGCGG AGAAGGCCCG CGCCGAGGCG GGGCGGGCGG ACGTCGTGGT CACCAACCAC 
GCGATGCTCG CCATCGACGC CCTGGAGGGC TACCAGGTGC TGCCCGACCA CGACGTGGTC 
GTGATCGACG AGGCGCACGA CCTGGTCGAC CGGGTCACCT CCGTGGCGAC CGAGGAGCTG 
GGCTCGGCGG CGATCACGAC GGCGGCCCGG CGGTGCGGCA AGCTCGTCGA CCAGGCCGTC 
GCGGACCGGC TCGCCGAGGC CGGTGACGGG CTCGGGATGC TGCTGGAGGA CGCGCCCGCA 
GGGCGGTTGG AGTCGCTGCC GAAGGCGCTG GCCACGACGG TGGCCGCGGT GCGGGACGCG 
GCGCGGGTGT GCATCACCTC GCTCGGGCCC GAGCGCAAGG AGGACGTGGA GGGCTCGACG 
GCGCGGAAGC TGGCGCTGTC GCTGCTGGAC GACATCCACG ACTGCGCGGT GCGGGTGCTG 
GAGGCGTTCG ACGACGAGCA CGACGTGGTG TGGGTGTCCG GCGACTTCGG CGGGAACCGC 
GCGCCGGTGC TGCGGGTCGC GCCGCTGGGC GTGGGCGGGC TGCTGCGGGA GCGGCTGTTC 
GGCAAGCGCA CCACGGTGCT GACGTCGGCG ACGCTCACCC TGGGCGGCAC GTTCGACACG 
CTGGCCAGGC AGTGGGGGCT GCCCGCGGCG TCGGGGGCGC GGAAGGCCGA GGGCAGCGGG 
AAGGCAGCGG GGACCGCCAC CGACAAGGAG CCGCCGTCGG ACCTGGGCGC GGTGAGGTGG 
ACCGGGCTGG ACGTGGGCTC GCCGTTCGAG CACGGCAGCA GCGGCATCCT GTACGTGGCG 
CGGCACCTGC CCCCGCCCGG TCGCGACGGC CTGCCGCCCG CGTACCTGGA CGAGCTGGAG 
GGCCTGGTGA ACGCGGCGGG CGGGCGCGCG CTGGGGCTGT TCTCCTCGAT GCGCGCGGCG 
AAGGCGGCGA CCGAGGCGCT GCGCGGGCGG GTGGACTTCC CGGTGCTGTG CCAGGGCGAC 
GACCAGACCG GGCAGCTGGT GAAGCGGTTC GCCGAGGACG CGCGGACGTG CCTGTTCGGC 
ACGCTGTCGC TGTGGCAGGG CGTGGACGTG CCCGGCCCCT CGCTGCAGCT GGTGGTGATG 
GACCGCATCC CGTTCCCCAG GCCGGACGAC CCGCTGGCGT CGGCGCGGCA GAAGGCCGTG 
GACTCCAGGG GCGGCAACGG GTTCCTGACC GTGTCGGCCA CGCACGCGGC GCTGCTGCTG 
GCGCAGGGCG CGGGGCGGTT GCTGCGGTCG ATGAACGACA AGGGCGTGGT GGCGGTGCTG 
GACCCGAGGC TGGCGACGGC GCGCTACGGC GGTTTCCTGC GCGCGTCGCT GCCGCCGTTC 
TGGACCACGT ACGACACCGA GGTGGTCAAG GCGGCGCTGA AGCGGCTGGA CGCGGCGAAC 
AAGTAG 

 

Protein sequence

MPPAITTVPD TRALLAIAVK AVGGAEREGQ VDMALAVERS IRTGEHLAVQ AGTGTGKSLA 
YLVPALRHAV AEESTVVIST ATIALQRQLV DRDLPRLAKA LRKELGREPR FAILKGRRNY 
LCMHRLHSGA PDEPEDAALF DPFAVSKLGR EVKRLHEWSS DTETGDRDEL VPGVPDQAWK 
QVSVTARECL GVSKCPIGTD CFAEKARAEA GRADVVVTNH AMLAIDALEG YQVLPDHDVV 
VIDEAHDLVD RVTSVATEEL GSAAITTAAR RCGKLVDQAV ADRLAEAGDG LGMLLEDAPA 
GRLESLPKAL ATTVAAVRDA ARVCITSLGP ERKEDVEGST ARKLALSLLD DIHDCAVRVL 
EAFDDEHDVV WVSGDFGGNR APVLRVAPLG VGGLLRERLF GKRTTVLTSA TLTLGGTFDT 
LARQWGLPAA SGARKAEGSG KAAGTATDKE PPSDLGAVRW TGLDVGSPFE HGSSGILYVA 
RHLPPPGRDG LPPAYLDELE GLVNAAGGRA LGLFSSMRAA KAATEALRGR VDFPVLCQGD 
DQTGQLVKRF AEDARTCLFG TLSLWQGVDV PGPSLQLVVM DRIPFPRPDD PLASARQKAV 
DSRGGNGFLT VSATHAALLL AQGAGRLLRS MNDKGVVAVL DPRLATARYG GFLRASLPPF 
WTTYDTEVVK AALKRLDAAN K