Gene Amir_0975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0975 
Symbol 
ID8325146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1087652 
End bp1088668 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content76% 
IMG OID644941520 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003098779 
Protein GI256375119 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGGGCAG CGGTCAGCAT CCGCGACGTC GCCGCGCGCG CCCGCGTGTC CGTCGGCACG 
GTCTCCAACG TGCTCAACCG CCCCGAGCTG GTGGCCGCCG CCACCAGGGA GCGCGTCCTG
GGCGCCATCA CCGAGCTCGG CTTCGTCCGC AACGACGCCG CCAGGCAGCT GCGCTCCGGC
ACCCCGCGCG CGCTCGGCCT GATGGTCCTG GACGTGGCCA ACCCGTTCTT CACCGACGTG
GCCAGCGGCG TGGAGGACAC CGCCAGCGAG GCCGGGCACG CCGTCATCCT GTGCAACAGC
GCCGAGTCCG CCCAGCGCGA GGCCAGGCAC GTCGAGCTGC TGGCCGAGCA GCGCGTGCAC
GGCGTCCTGA TCACGCCGGT CGACGCCGAC CTCGCCGCCG TGCGCCGGCT GCGCGCCCGA
GGGCTGTCCG TGGTGCTGCT CGACCACCCC ACCGACGATC CCGGGCTGTG CTCGGTGGCC
GTGGACGACC GCGCGGGCGG CGACCTGGCC GTCACGCACC TGCTGGCCGA GGGGCACGAG
CGGGTGGCCA TGGTCAACGG GCCCGCGCGC CTGCACCAGA CCGGCCAGCG GCTGCGCGGG
GCGCGCGACG CCGTGGCGCG CGCGGGGAAA CCGGTGGAGG CGCTGGAGGA GATCCCGGTG
ACCGCGCTGA ACGTCGCCTC CGGGCAGCGC GCGGCCGAGC AGATCCTGAC CCGCGCGCGG
CGGCCGGACG CGGTGTTCTG CGCCAACGAC CTGCTCGCGC TCGGGTTGCT CCAGGTGTTC
CTGCGCGCCG GGCTGCGCGT CCCCGAGGAC ATCGCGGTGG TCGGCTACGA CGACATCGAC
TTCGCCGCCG CCGCGGCCGT GCCGCTCACC TCGGTCCGGC AGCCGCGCAC GCTCATCGGG
CGCAGGGCGG CCGAGCTGGT GATCGCCGAG AGCACCGGGC CGCGCGACCA CGAGCACGAG
CACGTGCTGT TCGCGCCGGA GCTGGTGGTC AGGGAGTCCA GCAGGCGCGT CCGCTGA
 
Protein sequence
MGAAVSIRDV AARARVSVGT VSNVLNRPEL VAAATRERVL GAITELGFVR NDAARQLRSG 
TPRALGLMVL DVANPFFTDV ASGVEDTASE AGHAVILCNS AESAQREARH VELLAEQRVH
GVLITPVDAD LAAVRRLRAR GLSVVLLDHP TDDPGLCSVA VDDRAGGDLA VTHLLAEGHE
RVAMVNGPAR LHQTGQRLRG ARDAVARAGK PVEALEEIPV TALNVASGQR AAEQILTRAR
RPDAVFCAND LLALGLLQVF LRAGLRVPED IAVVGYDDID FAAAAAVPLT SVRQPRTLIG
RRAAELVIAE STGPRDHEHE HVLFAPELVV RESSRRVR