Gene Amir_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0960 
Symbol 
ID8325131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1070989 
End bp1073001 
Gene Length2013 bp 
Protein Length670 aa 
Translation table11 
GC content60% 
IMG OID644941506 
ProductN-6 DNA methylase 
Protein accessionYP_003098765 
Protein GI256375105 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACAGCA GCAAGCACAC GGAACTGGCG AACCACGCCT GGTCCGTCGC CGACCTCTTG 
CGCGGTGACT ACAAGCAATC CGACTACGGC AAGGTGATCC TGCCGTTCAC CGTGCTGCGC
CGCCTAGAAT GTGTTCTCAC GCCGACCAAG GACAAAGTCC TGGAGACTGC GGAACGGTTT
GCGGACCGCG AGATGGACCC CGACCGGTTC CTCCGCAAAG CATCCGGGCA CAGCTTCTAC
AACACCAGCA CATACACACT GAAGGCAATC GCAGGCGACG CAACGCACGC CGCCAAGTAC
CTCAACGAGT ACCTCGGCGC TTTTTCGCCC AACGCCCGCG AGGTACTGGA ACGCTACGAG
TTCGCCCAGC AGGTGAAGAA GCTAGATGCT GCGGACCTGC TGTATCAGGT TCTGGGGCGG
TTCGCCGACT TGGACCTGCG CCCTGAAGTG GTCACCAACC ATCAGATGGG ATACATCTTC
GAAGAACTAA TCCGCCGCTT CGCAGAGCAG TCCAACGAGA CCGCCGGTGA GCACTTCACG
CCGCGCGAGG TCATCGATCT GATGGTAAAA CTCCTGATCG CCCCGGACAG CGACGTGCTC
AGCGTTCCCG GTGCCGTCCG GACGGTCCTG GACCCGGCCT GCGGCACCGG CGGCATGCTC
AGCGCCGCTG AAGAGGAGAT TACGAAGCAC AACAAGGACG CCACGGTCAA GGTCTTCGGG
CAGGAGCTCA ACCCGGAGTC CTGGGCCATC TGCCGTTCCG ACATGATGAT CAAGGGGCAA
GACCCGGAGA ACATCAAGTT CGGCAACTCG TTCAGCGACG ACAGCCACGC GCACGCCACG
TTCGACTACG TACTGGCCAA CCCACCGTTC GGCGTGGACT GGAAGAAGGT CCAGGAGACG
GTCGAGCGGG AACACAAAAT GCTCGGTGAG AGCGGCCGGT TCGGTGCGGG ACTTCCTCGC
ATCAACGACG GCTCGCTGCT GTTCCTACAG CACATGATCT CGAAGATGAA GCCGGTCGAT
GTGGACGGCA AGGGCGGCAG CCGGGTCGCG ATCGTCTTCA ACGGCTCCCC GTTGTTCACT
GGCGCGGCTG ACTCCGGCGA GTCGAAGATC CGCCGGTGGA TCCTGGAGAA CGACTGGCTG
GAGGGCATCG TCGCCCTGCC GGACCAGCTC TTCTACAACA CGGGCATCTT CACGTACTTC
TGGATCGTCA GCAACCGCAA ATCCAAGGGA CGTCAGGGCA AGGTCGTCCT GCTGGATGCC
CGCGACTACT GGCAGAAGAT GCGCAAGTCG CTCGGCGACA AGCGCAAGAT GATCAATGAA
CAGCAGATCT CCGAGATCAC CCGCCTCTAC ACCGAGGCAC TGGCCATCCT GGATGCCGAG
AAGAACGACC AGATGCACGA CCTGCGCAAC AAGGGCAGGA AGATCAAGCT CTTCCGCAAT
GAGGATTTCG GCTATCGCCG TATCACTGTC GAACGCCCAC TGAAGCTACG CTTCAAGGTA
ACAGAGGAGA CACTCTTCGC ACTCAGGGCA GCAAAACCGG TCCAGAAGAC GACAGATGCC
GAAATGTTCA CTGCGGCACT GCGTCCGCTG ATCGGCAAGT CGTGGCTGAA AAAGACTGAA
GCCTGGCTCG ACATGAAAGA CGCGATCGTC GCAGCAGGAC TGTTGTGGCC TACAGGAGTT
CCGTTCGCCA AGGTGCTGCG GGATGCGGTC GGTGTTCGCG ATCCGGAGGG CGAGGTCCAG
AAAATCAAGG GAGAGCCCGA GCCAGATTCC GAGTTGCGCG ACTACGAAAA CGTCCCACTG
GACGAAGACG TGGACGAGTA CCTCCGTCGC GAAGTCTTGC CACATGCCCC GGATGCATGG
ATCGACCGCA CCAAGACGAA GATCGGCTAC GAGATCCCCT TTACCCGCCA CTTCTACGAG
TATCAGCCAC CTCGCCCACT GCCAGAAATT GATGCAGAAT TGAAATCACT GGAAGCCGAG
ATTAAGTTGC TACTGCACAA GGTGACCGAA TGA
 
Protein sequence
MNSSKHTELA NHAWSVADLL RGDYKQSDYG KVILPFTVLR RLECVLTPTK DKVLETAERF 
ADREMDPDRF LRKASGHSFY NTSTYTLKAI AGDATHAAKY LNEYLGAFSP NAREVLERYE
FAQQVKKLDA ADLLYQVLGR FADLDLRPEV VTNHQMGYIF EELIRRFAEQ SNETAGEHFT
PREVIDLMVK LLIAPDSDVL SVPGAVRTVL DPACGTGGML SAAEEEITKH NKDATVKVFG
QELNPESWAI CRSDMMIKGQ DPENIKFGNS FSDDSHAHAT FDYVLANPPF GVDWKKVQET
VEREHKMLGE SGRFGAGLPR INDGSLLFLQ HMISKMKPVD VDGKGGSRVA IVFNGSPLFT
GAADSGESKI RRWILENDWL EGIVALPDQL FYNTGIFTYF WIVSNRKSKG RQGKVVLLDA
RDYWQKMRKS LGDKRKMINE QQISEITRLY TEALAILDAE KNDQMHDLRN KGRKIKLFRN
EDFGYRRITV ERPLKLRFKV TEETLFALRA AKPVQKTTDA EMFTAALRPL IGKSWLKKTE
AWLDMKDAIV AAGLLWPTGV PFAKVLRDAV GVRDPEGEVQ KIKGEPEPDS ELRDYENVPL
DEDVDEYLRR EVLPHAPDAW IDRTKTKIGY EIPFTRHFYE YQPPRPLPEI DAELKSLEAE
IKLLLHKVTE