| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0892 |
|---|
| Symbol | |
|---|
| ID | 8325056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 984474 |
|---|
| End bp | 985142 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644941434 |
|---|
| Product | NADPH-dependent F420 reductase |
|---|
| Protein accession | YP_003098699 |
|---|
| Protein GI | 256375039 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2085] Predicted dinucleotide-binding enzymes |
|---|
| TIGRFAM ID | [TIGR01915] NADPH-dependent F420 reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTGGTG TCGAAGACCT CACGGTAGGC GTGCTCGGTG GTACCGGCGC CCAGGGCAAG
GGCCTCGCCC TGCGCTGGGC CAAGGCTGGC CTCAAGGTCG TGATCGGGTC CCGCTCCGCC
GAGCGGGCCG GGGAGGCCGC CTCGGCGATC CGCGCGGAGA CCGGCGCCGA GGGCGTCAGC
GGCGCGGACA ACGAGGCGTG CGCGCGGCAG GCGGACGTGG TGCTCGTCGC GGTCCCGTGG
GACGGGCACG CCGAGCTGCT GTCCGGGCTG CGCGAGGCCC TCGCGGGCAA GGTGGTCGTG
GACTGCGTGA ACCCGCTCGG CTTCGACAAG CAGGGCCCGT TCGCCCTGCC GGTCGCCGAG
GGCTCCGCCG CGCAGCAGGC CGAGGCGCTG CTGCCGGACT CGCGGGTCAC CGCCGCGTTC
CACCACGTGT CCGCCGTGAA GCTGGCCGAC CTCTCGCTCG CCGAGGTGGC GTGCGACGTG
CTCGTGCTCG GCGACGACCG CGAGGCCACC GACCTGGTGC GCGCGCTCGC CGACGCCGTC
CCCGGCTTCC GGGGCGTGTA CGGCGGCAGG CTGCGCAACG CCCACCAGGT GGAGGCGCTC
ACCGCGAACC TGATCGCGGT CAACCGCCGC TACAAGGCCC ACGCGGGCCT GCGGATCACC
GACATCTGA
|
|---|
| Protein sequence | MTGVEDLTVG VLGGTGAQGK GLALRWAKAG LKVVIGSRSA ERAGEAASAI RAETGAEGVS
GADNEACARQ ADVVLVAVPW DGHAELLSGL REALAGKVVV DCVNPLGFDK QGPFALPVAE
GSAAQQAEAL LPDSRVTAAF HHVSAVKLAD LSLAEVACDV LVLGDDREAT DLVRALADAV
PGFRGVYGGR LRNAHQVEAL TANLIAVNRR YKAHAGLRIT DI
|
|---|
| |