Gene Amir_0839 details

Gene Information

• Locus tag: Amir_0839
• ID: 8325002
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 923501
• End bp: 923893
• Gene Length: 393 bp
• Protein Length: 130 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 644941381
• Product: nitrite reductase (NAD(P)H), small subunit
• Protein accession: YP_003098646
• Protein GI: 256374986
• COG category: [P] Inorganic ion transport and metabolism; [R] General function prediction only
• COG ID: [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
• TIGRFAM ID: [TIGR02378] nitrite reductase [NAD(P)H], small subunit

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000000121321
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCCAG CTACGCCCAT GGCCCAGGTG GTCCCGATTG CCCAGGTGGG CCCGGTTGCT 
CCGGTGGGCC CGGTGGTCCC GGTGTGCGAC TTGAGCGCGT TGCAGCCCGA GCGCGGAGTC 
GCGGCGCTGC TGCCGGATGG GACGCAGGTC GCGGTGTTCC TCACCAGCGA CGGGGGGTTG 
CACGCGCTGG GCAACGTGGA CCCGTTCAGC GGGGCCGCGG TGCTGTCGCG GGGGATCGTC 
GGGGACCGGG GTGGGGTTCC GGTGGTGATC TCGCCGTTGT ACAAGCAGGC TTTCGAGCTG 
AGCACCGGGA GGTGCTTGGA CGACCCGGCG GTCGTGGTCG AGTCGTACCC GGTGAGCGTG 
GTGGAGGGTG TTGTGCGGGT GGGAGCGCCG TGA 

 

Protein sequence

MAPATPMAQV VPIAQVGPVA PVGPVVPVCD LSALQPERGV AALLPDGTQV AVFLTSDGGL 
HALGNVDPFS GAAVLSRGIV GDRGGVPVVI SPLYKQAFEL STGRCLDDPA VVVESYPVSV 
VEGVVRVGAP