Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0787 |
Symbol | |
ID | 8324950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 865668 |
End bp | 866474 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644941330 |
Product | transcriptional regulator, PaaX family |
Protein accession | YP_003098595 |
Protein GI | 256374935 |
COG category | [K] Transcription |
COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGAGCCC GTTCCGCGCT GTTCGACGTG TACGGCGGCC ACCTGCGACA GCGCGGTGGC GCCGCGACCA TCGCCGCCCT CGTCCGCCTG CTGGAGCCGC TGGACTTCGC GCCCCCCGCG GTGCGCACGG CCGTGTCGCG CACGGTCAGG CAGGGCTGGT TGGAGCCGGT GCGGCTGCCC GACGGCCCCG GTTACGCGAT GACGCCCCGC GCGGAGACGC GCCTCGACGA GGCGGCGGCC CGGATCTACC GGACCCGGCC GTCCACCTGG GACGGTCGCT GGCACGTGGT GGTGCTGGAC GAGGCGCCGA ACCGGGAGGT GCGGGAGCGG GTCGCGCCGT CGCTGCAGCT GCTCGGGTAC GGGTCGCTGG GGCCGGTCAC CTGGATCGCG CCGAGGCCGT CGCCGGAGCT GCGCGGGGTG CTGGCGGCCG AGGGCGTGGG GGCTTCGGTG TTCCTCGGCG AGCACGAGGG CGAGCCGTCC GACCTGGCGG CGCGGGCGTG GGACCTGGCG GAGCTGGGCG CGGACTACGC GCGGTTCGTG GCCGAGTGGG AGCCGGTGGT GTCCGCTGTG GACGGCGGGT CGCCCCCGGT GGCGTTCGCG GCCTCGCAGC GGTTCCTGCA CGCGTGGCGC AAGTTCCTGT TCCGCGATCC GGGCCTGCCG GACGAGCTGC TGCCCGCCGG GTGGGCGGGG ACGGGGGCCG CCGCGTTCTT CGACCGGCAC ACCGGGCGGC TGGCGGGGGC GGCGCGGGAG TTCGTGGACG ACTGCCTGGC GCCCGCGGGC GCGCGCGAGG CGCAGGAGTC CGGCTGA
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Protein sequence | MRARSALFDV YGGHLRQRGG AATIAALVRL LEPLDFAPPA VRTAVSRTVR QGWLEPVRLP DGPGYAMTPR AETRLDEAAA RIYRTRPSTW DGRWHVVVLD EAPNREVRER VAPSLQLLGY GSLGPVTWIA PRPSPELRGV LAAEGVGASV FLGEHEGEPS DLAARAWDLA ELGADYARFV AEWEPVVSAV DGGSPPVAFA ASQRFLHAWR KFLFRDPGLP DELLPAGWAG TGAAAFFDRH TGRLAGAARE FVDDCLAPAG AREAQESG
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