| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0713 |
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| Symbol | |
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| ID | 8324876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 789566 |
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| End bp | 790243 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644941257 |
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| Product | channel protein, hemolysin III family |
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| Protein accession | YP_003098522 |
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| Protein GI | 256374862 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.498959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACCGCGT CTACCGTTCC TTCGCAGCCC TCCCCGGCGC TGCGCCCCCG GATGCGGGGC
TGGCTGCACC TCTGGTCGTT CGTGGTGTCG GTGGCCATGG CGGCGACACT GGTCGCCCTG
GCGGCGACAA CCGTGTCGGC GAAGGCGGCT TACTCGACAG CCGTGTACGG CATCACGCTG
ATGGGCCTGT TCGGCGTCAG CGCCCTCTAC CACCGGGTGA ACTGGAAGAG CGTCAAGGCC
CGGACGTGGA TGAAGCGCAT GGACCACTCG ATGATCTTCG TGTTCATCGC GGGCTCGTAC
ACGCCGTTCG CGCTGACCGC GATGCCCCCG TCCACGGGCC ACACCGTGCT GTGGGTCGTG
TGGCTGGGTG CGCTGGGCGG CGTGGCGCTG AAGATGCTGT GGCCCAACTC GCCGAGGTGG
CTGGGCGTCC CCATCTACGT CGCGCTCGGC TGGGTGGCCG TGTTCACCCT GCCGGACATG
CTGGCCCACG CCGGCGTGGG CGTGGTGGCC CTGATCATCG CGGGCGGCCT GCTGTACACG
ATCGGGGCAG TCTTCTACGC GACCCGCTGG CCGAACTTCT GGCCGGACGT GTTCGGCTAC
CACGAGTTCT TCCACGCGAT GACGGTGCTC GCGGCGAGCT GCCACTGCGT GGCGATCTGG
TTGTCGATCT ACTCGTAG
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| Protein sequence | MTASTVPSQP SPALRPRMRG WLHLWSFVVS VAMAATLVAL AATTVSAKAA YSTAVYGITL
MGLFGVSALY HRVNWKSVKA RTWMKRMDHS MIFVFIAGSY TPFALTAMPP STGHTVLWVV
WLGALGGVAL KMLWPNSPRW LGVPIYVALG WVAVFTLPDM LAHAGVGVVA LIIAGGLLYT
IGAVFYATRW PNFWPDVFGY HEFFHAMTVL AASCHCVAIW LSIYS
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