Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0712 |
Symbol | |
ID | 8324875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 787541 |
End bp | 789514 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644941256 |
Product | protein of unknown function DUF255 |
Protein accession | YP_003098521 |
Protein GI | 256374861 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAACC GGCTCGCGTC CGCGACCAGC CCGTACCTGC TCCAGCACGC AGACAACCCG GTGCACTGGT GGGAGTGGAG CCCGGAGGCG TTCGCCGAGG CGCGCGAGCG GGACGTGCCG GTGCTGCTGT CGGTCGGCTA CGCGGCCTGC CACTGGTGCC ACGTCATGGC GCACGAGTCG TTCGAGGACG CGGAGACCGC CGAGTACCTG AACGCGCACT TCGTCAACGT CAAGGTCGAC CGCGAGGAGC GGCCCGACGT GGACGCGGTC TACATGTCCG TCACCCAGGC GCTCAGCGGC CACGGCGGCT GGCCCATGAC CTGCTTCCTC ACCCCGGACG GCGAGCCGTT CTACGCGGGC ACCTACTACC CGCCGACCCC GCGTCCGGGG ATGCCGTCGT TCCGGCAGGT CCTGGAGGCC ATCGAGCACG CCTGGCGCGA GCAGGGCGAC GAGGTGCGGG CGTCGGCGGC GGGCATCGTC GCCCAGCTCG CCCACACCCC GCTGCCCGAG GCGGCGGTGG ACGCGGACGT GCTCGACGGC GCGGTCGTGT CGCTGCTCGG GCACCTGGAC CGGGGCAACG GCGGGTTCGG CGGCGCGCCG AAGTTCCCGC CGTCGATGGC GCTGGAGTTC CTGCTGCGCG ACCACGAGCG CACCGGGTCC GTGCAGGCGC TGTCCATGGC CAGGCTGACC TGCGACGCGA TGGCGTCCGG CGGGATCTAC GACCAGCTCG GCGGCGGGTT CGCGCGGTAC AGCGTCGACG CGTCCTGGGT GGTGCCGCAC TTCGAGAAGA TGCTCTACGA CAACGCGCTG CTGCTGCGCG CGTACACCCA CCTGGCCAGG CTCGTGCCCG ACGAGCCGCG CTACCGCGAG GTCGTGGAGG ACACCGCCGG GTTCCTGCTG CGCGACCTGC TCACCCCGGA GGGCGGGTTC GCCGCCTCGC TCGACGCGGA CACCGGCGGG GTGGAGGGCG CGACGTACGC GTGGACGCCC GCGCAGCTGG TCGAGGTGCT CGGCGAGGAG GACGGGGCTC GGGCCGCCGC GCTGTACGGG GTGACCGAGG AGGGCACGTT CGAGCACGGC GCGTCCACGC TGCGGCTGCT GGGCGGGTCC GACCCGGCGC TGAAGGCCGC GCTGCTGGCG GCGCGCGCCG AGCGCGAGCA GCCCGGCCGG GACGACAAGG TGGTGACCTC GTGGAACGGC CTGGCCGTGG CGGCGCTGGC CGAGGCGGGG GCCGTGCTGG GCGTGCGGGC GTGGGTGGAG GCGGCCGAGC GCGCCGCCGG GCTGCTGCTG GACCTGCACG TGGTCGACGG CAGGCTGCTG CGCACCTCCC GCGACGGGCG GGCCGGTGGC GCGGCGGGTG TGCTGGAGGA CCACGGCTGC CTGGCCGACG GGCTGCTCGC GCTGCACCAG GTGACCGGGA CGGCGCGGTG GCTGACGGCG GCGTGCGACG TGCTGGACGT GGCGCTGGCG CGCTTCGCCG GCGACGAGCC GGGCGTCTGG TACGACACGG CCGACGACGC GGAGACCCTG GTCCACCGCC CGGCCGACCC GGCCGACAAC GCGAGCCCGT CCGGGGCGTC GTCGCTGGCA GGGGCGCTGC TGACCGCGTC GGCGCTGGGC GCGCCGAGGG CGGGGGAGTA CCGGGAGGCG GCCGAGCGGG CGGTGGCGCG CGCCGGTCTG CTGGCGGCGC GGGAGCCGAG GTTCGCCGGG CACTGGCTGA GCGTCGCGGA GGCGCTGGCG ATGGGCCCCG TGCAGGTGGC CCTGGTGGGC GGCTCCCCGA GCCTGCTGGC GGCGGCCTGG TCGGGCGTGC ACGGCGGCGG CGTGGTGGTG TCGGGCGAGC CGGACACGGC CCCGCTCCTG GCAGACCGGC CGCTGGTGGG CGGGGAGCCT GCGGCGTACG TGTGCCGGGG CTTCGTGTGC GACCGGCCGG TGACGACGGT GGAGGACCTG ACCGCGGCGC TGGTGGCGCG GTAG
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Protein sequence | MTNRLASATS PYLLQHADNP VHWWEWSPEA FAEARERDVP VLLSVGYAAC HWCHVMAHES FEDAETAEYL NAHFVNVKVD REERPDVDAV YMSVTQALSG HGGWPMTCFL TPDGEPFYAG TYYPPTPRPG MPSFRQVLEA IEHAWREQGD EVRASAAGIV AQLAHTPLPE AAVDADVLDG AVVSLLGHLD RGNGGFGGAP KFPPSMALEF LLRDHERTGS VQALSMARLT CDAMASGGIY DQLGGGFARY SVDASWVVPH FEKMLYDNAL LLRAYTHLAR LVPDEPRYRE VVEDTAGFLL RDLLTPEGGF AASLDADTGG VEGATYAWTP AQLVEVLGEE DGARAAALYG VTEEGTFEHG ASTLRLLGGS DPALKAALLA ARAEREQPGR DDKVVTSWNG LAVAALAEAG AVLGVRAWVE AAERAAGLLL DLHVVDGRLL RTSRDGRAGG AAGVLEDHGC LADGLLALHQ VTGTARWLTA ACDVLDVALA RFAGDEPGVW YDTADDAETL VHRPADPADN ASPSGASSLA GALLTASALG APRAGEYREA AERAVARAGL LAAREPRFAG HWLSVAEALA MGPVQVALVG GSPSLLAAAW SGVHGGGVVV SGEPDTAPLL ADRPLVGGEP AAYVCRGFVC DRPVTTVEDL TAALVAR
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