Gene Amir_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0712 
Symbol 
ID8324875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp787541 
End bp789514 
Gene Length1974 bp 
Protein Length657 aa 
Translation table11 
GC content76% 
IMG OID644941256 
Productprotein of unknown function DUF255 
Protein accessionYP_003098521 
Protein GI256374861 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1331] Highly conserved protein containing a thioredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAACC GGCTCGCGTC CGCGACCAGC CCGTACCTGC TCCAGCACGC AGACAACCCG 
GTGCACTGGT GGGAGTGGAG CCCGGAGGCG TTCGCCGAGG CGCGCGAGCG GGACGTGCCG
GTGCTGCTGT CGGTCGGCTA CGCGGCCTGC CACTGGTGCC ACGTCATGGC GCACGAGTCG
TTCGAGGACG CGGAGACCGC CGAGTACCTG AACGCGCACT TCGTCAACGT CAAGGTCGAC
CGCGAGGAGC GGCCCGACGT GGACGCGGTC TACATGTCCG TCACCCAGGC GCTCAGCGGC
CACGGCGGCT GGCCCATGAC CTGCTTCCTC ACCCCGGACG GCGAGCCGTT CTACGCGGGC
ACCTACTACC CGCCGACCCC GCGTCCGGGG ATGCCGTCGT TCCGGCAGGT CCTGGAGGCC
ATCGAGCACG CCTGGCGCGA GCAGGGCGAC GAGGTGCGGG CGTCGGCGGC GGGCATCGTC
GCCCAGCTCG CCCACACCCC GCTGCCCGAG GCGGCGGTGG ACGCGGACGT GCTCGACGGC
GCGGTCGTGT CGCTGCTCGG GCACCTGGAC CGGGGCAACG GCGGGTTCGG CGGCGCGCCG
AAGTTCCCGC CGTCGATGGC GCTGGAGTTC CTGCTGCGCG ACCACGAGCG CACCGGGTCC
GTGCAGGCGC TGTCCATGGC CAGGCTGACC TGCGACGCGA TGGCGTCCGG CGGGATCTAC
GACCAGCTCG GCGGCGGGTT CGCGCGGTAC AGCGTCGACG CGTCCTGGGT GGTGCCGCAC
TTCGAGAAGA TGCTCTACGA CAACGCGCTG CTGCTGCGCG CGTACACCCA CCTGGCCAGG
CTCGTGCCCG ACGAGCCGCG CTACCGCGAG GTCGTGGAGG ACACCGCCGG GTTCCTGCTG
CGCGACCTGC TCACCCCGGA GGGCGGGTTC GCCGCCTCGC TCGACGCGGA CACCGGCGGG
GTGGAGGGCG CGACGTACGC GTGGACGCCC GCGCAGCTGG TCGAGGTGCT CGGCGAGGAG
GACGGGGCTC GGGCCGCCGC GCTGTACGGG GTGACCGAGG AGGGCACGTT CGAGCACGGC
GCGTCCACGC TGCGGCTGCT GGGCGGGTCC GACCCGGCGC TGAAGGCCGC GCTGCTGGCG
GCGCGCGCCG AGCGCGAGCA GCCCGGCCGG GACGACAAGG TGGTGACCTC GTGGAACGGC
CTGGCCGTGG CGGCGCTGGC CGAGGCGGGG GCCGTGCTGG GCGTGCGGGC GTGGGTGGAG
GCGGCCGAGC GCGCCGCCGG GCTGCTGCTG GACCTGCACG TGGTCGACGG CAGGCTGCTG
CGCACCTCCC GCGACGGGCG GGCCGGTGGC GCGGCGGGTG TGCTGGAGGA CCACGGCTGC
CTGGCCGACG GGCTGCTCGC GCTGCACCAG GTGACCGGGA CGGCGCGGTG GCTGACGGCG
GCGTGCGACG TGCTGGACGT GGCGCTGGCG CGCTTCGCCG GCGACGAGCC GGGCGTCTGG
TACGACACGG CCGACGACGC GGAGACCCTG GTCCACCGCC CGGCCGACCC GGCCGACAAC
GCGAGCCCGT CCGGGGCGTC GTCGCTGGCA GGGGCGCTGC TGACCGCGTC GGCGCTGGGC
GCGCCGAGGG CGGGGGAGTA CCGGGAGGCG GCCGAGCGGG CGGTGGCGCG CGCCGGTCTG
CTGGCGGCGC GGGAGCCGAG GTTCGCCGGG CACTGGCTGA GCGTCGCGGA GGCGCTGGCG
ATGGGCCCCG TGCAGGTGGC CCTGGTGGGC GGCTCCCCGA GCCTGCTGGC GGCGGCCTGG
TCGGGCGTGC ACGGCGGCGG CGTGGTGGTG TCGGGCGAGC CGGACACGGC CCCGCTCCTG
GCAGACCGGC CGCTGGTGGG CGGGGAGCCT GCGGCGTACG TGTGCCGGGG CTTCGTGTGC
GACCGGCCGG TGACGACGGT GGAGGACCTG ACCGCGGCGC TGGTGGCGCG GTAG
 
Protein sequence
MTNRLASATS PYLLQHADNP VHWWEWSPEA FAEARERDVP VLLSVGYAAC HWCHVMAHES 
FEDAETAEYL NAHFVNVKVD REERPDVDAV YMSVTQALSG HGGWPMTCFL TPDGEPFYAG
TYYPPTPRPG MPSFRQVLEA IEHAWREQGD EVRASAAGIV AQLAHTPLPE AAVDADVLDG
AVVSLLGHLD RGNGGFGGAP KFPPSMALEF LLRDHERTGS VQALSMARLT CDAMASGGIY
DQLGGGFARY SVDASWVVPH FEKMLYDNAL LLRAYTHLAR LVPDEPRYRE VVEDTAGFLL
RDLLTPEGGF AASLDADTGG VEGATYAWTP AQLVEVLGEE DGARAAALYG VTEEGTFEHG
ASTLRLLGGS DPALKAALLA ARAEREQPGR DDKVVTSWNG LAVAALAEAG AVLGVRAWVE
AAERAAGLLL DLHVVDGRLL RTSRDGRAGG AAGVLEDHGC LADGLLALHQ VTGTARWLTA
ACDVLDVALA RFAGDEPGVW YDTADDAETL VHRPADPADN ASPSGASSLA GALLTASALG
APRAGEYREA AERAVARAGL LAAREPRFAG HWLSVAEALA MGPVQVALVG GSPSLLAAAW
SGVHGGGVVV SGEPDTAPLL ADRPLVGGEP AAYVCRGFVC DRPVTTVEDL TAALVAR