Gene Amir_0701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0701 
Symbol 
ID8324864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp778707 
End bp779828 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content74% 
IMG OID644941245 
ProductRDD domain containing protein 
Protein accessionYP_003098510 
Protein GI256374850 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCTC CGCAGCCGCC AGGGGACCAG CAGTTCGGCG CACAGCCCCA GCCCCCCGCG 
GCTCCCAACC CCGACGCGAC CCAGGTCGTG CCGCCGGGCG CGGGCCAGTC CGCCGCGAAC
CCCGACGCGA CCCAGGTCGT GCCGCAGGGA GCGGGCGCGA ACCCCGACGC CACGCAGGTG
GTCACCCCCG GCATGACCCA GGGCGCCCAG CCGAGCTCCG ACGCGACCCA GGTCGTGCCC
GGCGGGTCCG GCGCCCAGAT CCCGCAGTAC GGCACGCCGT CCGCCTCGGG CGGCTTCCCG
GCGCAGCAGC CGGGGTACCC GCCGTCGAAC CCGTACGGCC AGCCCGCCGC GCCGAACCCG
TACGGCCAGC CCCAGTCCCC GTACGGCCAG CCCGGCTACG GCCAGCAGCC CGCGACGGGC
CTGCCGCAGG CCTACGGGCA CGGCGGCTAC GGCCAGCCCG CCCCGCCCGC GGGCGGGTAC
GCGGAGTGGG GCAGCCGCGT CATCGCCGGT CTGATCGACC AGGGCGTCGT GGTCGTGGTC
GTGATCGTCG CCGCGATCCT CATGGGCAGC GTGGGCCCGA GCGACATCGG CCTCATGATG
GGCATCGCCG GGGTCCTCTA CCTCGCCGCC ATCGGCTGGG GGTTCTACAA CCTCTACCTG
ATGGGCACCA CCGGGCAGTC GTTCGGCAAG AAGATCGCCA AGATCAAGCT GATCAGCGAG
GAGACCGGGC AGGTCATCGG CTTCGGCGGC GCGTTCGTGC GCGGCCTGTG CCACTTCGTC
GACAACATCG CCTGCGGCAT CGGCTACCTC GCCCCGCTGT GGGAGAGCAA GAAGCAGACC
TGGGCCGACA AGATCGTCAA GACGATCGTC GTCAACGTGC CCGACGCCCC CGGCGGCCAC
GGCCAGCAGC CCGGCGCCCC CGCGTACGGC CAGCAGCCCG GCTACGGGCA GCAGCCGCAG
CAGGGCTACG GCCAGCAGCC CGGCTACGGC CAGGTCCCGC AGGCGGGCTA CGGCCAGCCG
CAGCAGCACT ACGGCCAGCA GCCCGGCTAC GGCCAGGCCC CGCAGCAGCC GTACGGCCAG
CCGCCCCAGC AGGGCTACGG CCAGCAGCCG CCGCAGTGGT GA
 
Protein sequence
MNAPQPPGDQ QFGAQPQPPA APNPDATQVV PPGAGQSAAN PDATQVVPQG AGANPDATQV 
VTPGMTQGAQ PSSDATQVVP GGSGAQIPQY GTPSASGGFP AQQPGYPPSN PYGQPAAPNP
YGQPQSPYGQ PGYGQQPATG LPQAYGHGGY GQPAPPAGGY AEWGSRVIAG LIDQGVVVVV
VIVAAILMGS VGPSDIGLMM GIAGVLYLAA IGWGFYNLYL MGTTGQSFGK KIAKIKLISE
ETGQVIGFGG AFVRGLCHFV DNIACGIGYL APLWESKKQT WADKIVKTIV VNVPDAPGGH
GQQPGAPAYG QQPGYGQQPQ QGYGQQPGYG QVPQAGYGQP QQHYGQQPGY GQAPQQPYGQ
PPQQGYGQQP PQW