Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0701 |
Symbol | |
ID | 8324864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 778707 |
End bp | 779828 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644941245 |
Product | RDD domain containing protein |
Protein accession | YP_003098510 |
Protein GI | 256374850 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCTC CGCAGCCGCC AGGGGACCAG CAGTTCGGCG CACAGCCCCA GCCCCCCGCG GCTCCCAACC CCGACGCGAC CCAGGTCGTG CCGCCGGGCG CGGGCCAGTC CGCCGCGAAC CCCGACGCGA CCCAGGTCGT GCCGCAGGGA GCGGGCGCGA ACCCCGACGC CACGCAGGTG GTCACCCCCG GCATGACCCA GGGCGCCCAG CCGAGCTCCG ACGCGACCCA GGTCGTGCCC GGCGGGTCCG GCGCCCAGAT CCCGCAGTAC GGCACGCCGT CCGCCTCGGG CGGCTTCCCG GCGCAGCAGC CGGGGTACCC GCCGTCGAAC CCGTACGGCC AGCCCGCCGC GCCGAACCCG TACGGCCAGC CCCAGTCCCC GTACGGCCAG CCCGGCTACG GCCAGCAGCC CGCGACGGGC CTGCCGCAGG CCTACGGGCA CGGCGGCTAC GGCCAGCCCG CCCCGCCCGC GGGCGGGTAC GCGGAGTGGG GCAGCCGCGT CATCGCCGGT CTGATCGACC AGGGCGTCGT GGTCGTGGTC GTGATCGTCG CCGCGATCCT CATGGGCAGC GTGGGCCCGA GCGACATCGG CCTCATGATG GGCATCGCCG GGGTCCTCTA CCTCGCCGCC ATCGGCTGGG GGTTCTACAA CCTCTACCTG ATGGGCACCA CCGGGCAGTC GTTCGGCAAG AAGATCGCCA AGATCAAGCT GATCAGCGAG GAGACCGGGC AGGTCATCGG CTTCGGCGGC GCGTTCGTGC GCGGCCTGTG CCACTTCGTC GACAACATCG CCTGCGGCAT CGGCTACCTC GCCCCGCTGT GGGAGAGCAA GAAGCAGACC TGGGCCGACA AGATCGTCAA GACGATCGTC GTCAACGTGC CCGACGCCCC CGGCGGCCAC GGCCAGCAGC CCGGCGCCCC CGCGTACGGC CAGCAGCCCG GCTACGGGCA GCAGCCGCAG CAGGGCTACG GCCAGCAGCC CGGCTACGGC CAGGTCCCGC AGGCGGGCTA CGGCCAGCCG CAGCAGCACT ACGGCCAGCA GCCCGGCTAC GGCCAGGCCC CGCAGCAGCC GTACGGCCAG CCGCCCCAGC AGGGCTACGG CCAGCAGCCG CCGCAGTGGT GA
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Protein sequence | MNAPQPPGDQ QFGAQPQPPA APNPDATQVV PPGAGQSAAN PDATQVVPQG AGANPDATQV VTPGMTQGAQ PSSDATQVVP GGSGAQIPQY GTPSASGGFP AQQPGYPPSN PYGQPAAPNP YGQPQSPYGQ PGYGQQPATG LPQAYGHGGY GQPAPPAGGY AEWGSRVIAG LIDQGVVVVV VIVAAILMGS VGPSDIGLMM GIAGVLYLAA IGWGFYNLYL MGTTGQSFGK KIAKIKLISE ETGQVIGFGG AFVRGLCHFV DNIACGIGYL APLWESKKQT WADKIVKTIV VNVPDAPGGH GQQPGAPAYG QQPGYGQQPQ QGYGQQPGYG QVPQAGYGQP QQHYGQQPGY GQAPQQPYGQ PPQQGYGQQP PQW
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