Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0620 |
Symbol | |
ID | 8324780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 684324 |
End bp | 686348 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644941161 |
Product | peptidase S1 and S6 chymotrypsin/Hap |
Protein accession | YP_003098429 |
Protein GI | 256374769 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.5236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAGA ACGAGCCGCA GCACCAGCCG CAGCAGCCCG ACGACCAGAG TCCCTGGGCG CGCGGCGGCG GCGAGGCCGG TCTTCACCCC GGTGGCGGGC AACGGGATGT CCACCAGCCG GACTCCGCGC GGGAGCACTC CGCCCGCGAC GGGCAGCAGG ACCGGCCGAC CACGCGGCTC GGTCCGGACG ACTCCGACCG GTCGGGCGCG CAGGGCGCCA CGACCGGGGC GGACCAGGCC ACCCGGTCCG AGGCGCTGCA GGGCGCCCCG GCCGGAGCGG CCACCGACCG GCCCGCGAGG GCCGAGTCGG GCACCACCGG TGCGGCGGAG GCTTTGCAGG GGGCCGACGC CGATCGGGGA ACCGGAGGGC AGGGCGTGCA GGGCGCCCAG TCCCTCGCCG GGTGGCCGGG CGCTGTGCAG GGGGCGCCCG CCCACCCGGC TTCCGGGCCC ACCACCGGAG GCGCCTCCCA GACTTCCGGG CAGCCGCTCA CCGCGGCGGC TCAGCCCGGC GTGACGCAGC AGATCAGCGC GTCCCAGATG TCCGCCCCGA CGTCCTCGCC GGCGTCCGCC CCGATGCCGT TCCAGGCGGC CCAGGCGTCG CAGGGCGGTT CCACTCAGGG CGGTTCCGCT CAGCAGATCA CCCCCGGTCA GCAGCCCTTC GGCGAGCAGT CCACCCAGGC GGGCCCGTTC GCGGGGCCGG GTGGCCGGTC GACCGAACAG GGGGTTCAGG TGAACGCCTT CGGCCAGCCC GTCCAGTCCG ACCACGCGGC CGGGACCGCC TACGGCCCGC CCGCGTCGGG CGGGTTCCCC GGCCAGCACG GCGGCCTCGG TCAATCCGGT GGCCTGGGTC AGCCCGGTGG CCTCGGTCAG CCCGGTGGCC CCGGTCAGCC GGGGTCCGGC CCGTACTACG CGGTGCCTGG CTCGGACGGC CAGCTCCCGC CGCAGCGCGC GAAGTCCGGC GGCAGGGGCA GGGTCCTCGC CGGTGTGGCC GCGCTGGTGC TCGTGGTCGG CGGCGTCGCC GGTGGTGTCG GCGGTTACGT CGGCTACCAG GCCGCGGGTG GTTCCGGTTC GGTGGTCAAC GCCCTGAACG CGGCCCCGCC CGCCCAGCAG ACCGCCGACG CGCCCGCCGG TTCGGTGGAG GCCGTCGCGC AGAAGGTGCT GCCCACGGTG GTCCAGGTTC AGGTCAGCGG CGGCGCCGGG TCCGGTTTCG TGATCAGCTC CGACGGTCTG GTCGTCACGA ACAACCACGT GGTCGAGTCG GCCGCGCGGG GCGGCGCCGT CCGGGTGGTC TTCCAGGACG GCAGGACGGC CAGCGCCAAG ATCATCGGCC GTGACCCGTC GTCCGACCTG GCCGTGATCA AGGCGGACGG CGTCTCCGGC CTGCCCACCG CCGAGCTCGG CAACTCCTCC GACCTGAAGA TCGGCCAGCA GGTGATCGCG GTCGGCTCCC CGTTCGACCT GACCGGCACG GTCACCTCGG GCATCGTCAG CTCGCTGAAC CGCCCGGTGC GGGCCGGTGG CGAGTCGGGC AGCCAGTCCA CGGTGCTCAA CGCCGTCCAG ACCGACGCGG CGATCAACCC CGGCAACTCC GGCGGGCCGC TGATCGACAT GAACGGCCGC GTGATCGGCA TCAACTCGGC CATCTACAGC CCGAACTCCA GCCAGACCTC GCAGGGCGGT TCGGTCGGCA TCGGCTTCGC GATCCCGATC GACCAGGCCA GGCGCACCGC GACCGAGCTG AGCGAGACCG GCAAGGCCAC CCAGACCGTG CTCGGCGTCC AGGTCACCGA CGCCCCGCAG GGCGGCGCGG CGGTCCAGGA GGTCACCGAG GGCGGCGCGG CGGGCCAGGC GGGCGTCAAG GCGGGCGACG TGGTCACCAA GTTCGGCGAC CGCCGCATCG ACAGCTCGGA CGCCCTGGTC GCGGCCGTCC GCTCGGACAC CCCCGGCGAC AAGGTCACCC TCACCCTGGC CGACGGCCGC ACGGTGGAGG TCACCCTGGG CAGCCAGGAG GCCCCGGTCA ACTGA
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Protein sequence | MTENEPQHQP QQPDDQSPWA RGGGEAGLHP GGGQRDVHQP DSAREHSARD GQQDRPTTRL GPDDSDRSGA QGATTGADQA TRSEALQGAP AGAATDRPAR AESGTTGAAE ALQGADADRG TGGQGVQGAQ SLAGWPGAVQ GAPAHPASGP TTGGASQTSG QPLTAAAQPG VTQQISASQM SAPTSSPASA PMPFQAAQAS QGGSTQGGSA QQITPGQQPF GEQSTQAGPF AGPGGRSTEQ GVQVNAFGQP VQSDHAAGTA YGPPASGGFP GQHGGLGQSG GLGQPGGLGQ PGGPGQPGSG PYYAVPGSDG QLPPQRAKSG GRGRVLAGVA ALVLVVGGVA GGVGGYVGYQ AAGGSGSVVN ALNAAPPAQQ TADAPAGSVE AVAQKVLPTV VQVQVSGGAG SGFVISSDGL VVTNNHVVES AARGGAVRVV FQDGRTASAK IIGRDPSSDL AVIKADGVSG LPTAELGNSS DLKIGQQVIA VGSPFDLTGT VTSGIVSSLN RPVRAGGESG SQSTVLNAVQ TDAAINPGNS GGPLIDMNGR VIGINSAIYS PNSSQTSQGG SVGIGFAIPI DQARRTATEL SETGKATQTV LGVQVTDAPQ GGAAVQEVTE GGAAGQAGVK AGDVVTKFGD RRIDSSDALV AAVRSDTPGD KVTLTLADGR TVEVTLGSQE APVN
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