| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0563 |
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| Symbol | |
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| ID | 8324722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 612716 |
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| End bp | 614470 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 81% |
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| IMG OID | 644941107 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003098376 |
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| Protein GI | 256374716 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.195067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCGCCC ACGCGCCCGC CGACCGCCAC ACCACCACCC ACCCGCCCGC CACCGATCGC
CCGCCCGCCA CCACCGGCAG GGCCACCCGC GGCGGCGCTC CCACCGCCGA CCGCGCCCCG
ATCGGCAGCC GGATTCCGAC CGCTGGTCAG CCCGCGGCGG CCAGCCGTGT CCCCGCCGAC
GCCAGCGCCC CCACCACCAG CCGTGCTGCC ACCAGCCACG CCGGGGCCAA CGCGGTTGCT
CCTGCCGCTG GCCGCACCCC CGTTGGTCGT GCCTCGGCGG ACGCCGGTGG TCCGACCGCC
GGTCGTGGTG CCGCTGGTCG CGTCCCGGCC GCTGCTGGCG CGCCTGCCGC CAGCCACGCC
GCCGCCAGCC GTGCCTCGGC CGGTGCGGGT GCTCCCGCCG CCGGCCGTGC TGCCCCCGGC
CCCGCCCCAG CCGAAGTCGG CGCGCCCGCC ACCGGCCACA CCACCGCCCC CCGCCCCCGC
GCCCCCCACC CCTTCGCCGA CCACCCCACC GCCCCACCCA CCACCGACCT GGTCGACCCC
ACCTGGGGCC CCAGGTCCGA CCCGGTGGCC CGGGCGCTGC GCATGATCGT CGACGGCGTG
GTCGACCGCG AGGGCGTGCC CGGTCTCGCC ACCCGGCTCG GCTACAGCGT CCGCCAGGTC
GAGCGCCGCC TCCTGGCCGA GCTGGGCTCC GGCCCGCTCG CCATCGCCCG CGCCCGCCGC
GCGCGCACCG CCCGCCTCCT GGCCGAGACC ACCGCCCTCC CCATGACCGA GATCGCCGTG
GCGGCGGGCT TCGCGAGCGT GCGCGCGTTC AACGAGACGG TGCGCGAGCT GTTCGGCCGC
TCGCCCACCG ACCTGCGCGG CGGTCGCCGG GCTCCCGGCG GCGTGCCGGG CGCGGTCGTG
CTGCGGTTGC CGTTCCGGGG GCCGCTGCAC GCGCCGTCGC TGTTCGGGCC GCTGGTCGCG
AACGCCGTCC CCGGCGTCGA GGAGTGGCGC GACGGCGCCT ACCGCCGCAC GCTGCGCCTC
CCGCGCGGCC ACGGCGTGGT CTCGCTGCGC CCGCGCGCCG ACCACGTCGA GTGCGACCTG
ACCCTCACCG ACTCCCGCGA CCTCCCGGTC GCGATCTCCC GCTGCCGCCG CGCGCTGGAC
CTGGACGCCG ACCCCGCCGA GGTCGACGGC GCCCTCCGCG CGGACCCCGC CCTGCGCCCG
CTGGTCGACG CCGCGCCGGG CACCAGGGTC CCCGGCGTGG TCGACGGCGC GGAGTGCGCG
GTGCGCGCCC TGCTCGGCGA AGGCACGGGC ACGGGCGCAG CCATGGGCGC GGGCGCCAAC
GCGGGCTGGG CGCACCGGGT GGTGCGCGAG GCGGGCGAGG CCGTCCCCGA CCCGGCGGGC
GGCGGCCTGA CCCACCTCTT CCCGACGCCG CAAGCGCTCC TGGACCTGGA CCCGGCCCTG
CTCCCCCCAC CGGCGCGCGC CCCGCTCACC GCCCTGCTCA CCGCGCTGGT GGGCGGCGTC
GACCTGGGCG CGGGCGCGGA CCGCGCCGAG GCCCGGTCGG CGCTGCGCTG CGCGGGCGAG
CGCGTGCTGG ACGCCGTCCT CACCCGCTCG CTGGGCGACC CGGACGGCTT CTGCCCCGAC
GACCCCGCCG TGCGCGCCGC CGCGGGCGGG ATCGGCCTGC CGGTCACCGC CGCCGCGCTG
GCCGACCGCT CGCGCGCGTG GCGCCCGTGG CGCGCCTACG CGACCCGCTA CCTGCTGGGC
CGCGCCCCGA CCTGA
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| Protein sequence | MGAHAPADRH TTTHPPATDR PPATTGRATR GGAPTADRAP IGSRIPTAGQ PAAASRVPAD
ASAPTTSRAA TSHAGANAVA PAAGRTPVGR ASADAGGPTA GRGAAGRVPA AAGAPAASHA
AASRASAGAG APAAGRAAPG PAPAEVGAPA TGHTTAPRPR APHPFADHPT APPTTDLVDP
TWGPRSDPVA RALRMIVDGV VDREGVPGLA TRLGYSVRQV ERRLLAELGS GPLAIARARR
ARTARLLAET TALPMTEIAV AAGFASVRAF NETVRELFGR SPTDLRGGRR APGGVPGAVV
LRLPFRGPLH APSLFGPLVA NAVPGVEEWR DGAYRRTLRL PRGHGVVSLR PRADHVECDL
TLTDSRDLPV AISRCRRALD LDADPAEVDG ALRADPALRP LVDAAPGTRV PGVVDGAECA
VRALLGEGTG TGAAMGAGAN AGWAHRVVRE AGEAVPDPAG GGLTHLFPTP QALLDLDPAL
LPPPARAPLT ALLTALVGGV DLGAGADRAE ARSALRCAGE RVLDAVLTRS LGDPDGFCPD
DPAVRAAAGG IGLPVTAAAL ADRSRAWRPW RAYATRYLLG RAPT
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