Gene Amir_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0501 
Symbol 
ID8324660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp542596 
End bp543255 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content72% 
IMG OID644941045 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_003098314 
Protein GI256374654 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.713999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGAAG CCACGACCAG CATCACGCTG CCGGCTATGC GAGTGTCCTA CGAGCGGAGC 
GCGCTGGGCG AGGGCGACCT GGCCGCCACC TGGCACGAGC AGCTGCAGCT GTGGCTGGAC 
GAGGCGACCA ACGCGGGCCT GCTGGAGCCC AACGCGATGG TGCTGGCCAC CGCCGACCCG 
AGCGGGCGGC CGTCGTCGCG GACCGTGCTG GCGAAGGGCC TGGACGAGCG CGGCCTGGTG 
TTCTTCACCA ACTACACCTC GGCCAAGTCG CACGACCTGA TGGCCACCAG GTACGCCTCC 
ACCACGTTCC CCTGGTACGG CCTGCAGCGG CAGGCGCACG TGCGGGGCAC CGTGGAGAAG 
GTCAGCCACG CGGAGACCAC CGAGTACTGG GAGAGCCGCC CGAGGGGCTC CCAGCTGGGC 
GCCTGGGCCT CGCCGCAGTC ACGGGTGGTG ACCGGTCGGC CCACCCTGGA GTCCGCGCTC 
AACAAGATCG AGCGCCAGTT CACCGACACC GAGCGGGTCC CGGTGCCGCC GCACTGGGGC 
GGCTGGCGCA TCCGGCCCGA GGAGGTCGAG TTCTGGCAGG GCCGCCAGGA CCGGATGCAC 
GACCGCCTGC GCTTCCGCCT CGGCCGGGAC GGCTGGGAGA CCGAGCGCGT GGCCCCCTGA
 
Protein sequence
MSEATTSITL PAMRVSYERS ALGEGDLAAT WHEQLQLWLD EATNAGLLEP NAMVLATADP 
SGRPSSRTVL AKGLDERGLV FFTNYTSAKS HDLMATRYAS TTFPWYGLQR QAHVRGTVEK 
VSHAETTEYW ESRPRGSQLG AWASPQSRVV TGRPTLESAL NKIERQFTDT ERVPVPPHWG 
GWRIRPEEVE FWQGRQDRMH DRLRFRLGRD GWETERVAP