Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0491 |
Symbol | |
ID | 8324650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 529828 |
End bp | 531102 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644941035 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003098304 |
Protein GI | 256374644 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGCGA CCGGCGCGCC CCCGGCCCCG CGGCGGGCCG GGGCGTTCTC CTCGCTGCGC TTGCGCAACT ACCGGCTCTA CGCCTCCGGC CAGCTCGTCT CGCTGGTCGG GCTGTGGATG GAGCGGGTCG CGCAGGACTG GCTGGTGCTC CAGCTGTCCG GCGGCGACCC GATCGCGCTG GGCGTGGCCA CGGCCCTGCA GTTCGGCCCG GTGCTGGCGC TGTCCATGTG GGCGGGCGTG CTGGCCGACC GGTTGGACAA GCGCCTGCTG CTGATCGGCC TCCAGTCCGG CATGGCGGTG CTCGCGCTGG TGCTCGGCCT GGTCGACCTG TCCGGGGTCG CGCAGCTGTG GCACGTGTAC CTGCTGTGCC TGGCGGGCGG CGTGCTGTCC GCCGTGGAGG CCCCGGTGCG GCAGTCGTTC GCGGTGGAGA TGGTCGGCCG CGAGCAGGTC GCGAACGCGG TCGCGCTCAA CTCGATGACG TTCAACGCCG CCCGGATGAT CGGCCCGGCC GTGGCGGGCG GGCTGATCGT GGTGGTCGGC ACCGGCTGGA TCTTCCTGAT CCGCGCGGCG AGCTTCGCGG GCGTGCTGGC CGGGCTCGCC CTGATGCGGG CCGCCGAGCT GCACCGGGGC GCGCCGGTGG CCAAGGCCAG GGGGCAGCTC GCCGAGGGGC TGCGCTACCT GCGCGGCAGG CCGGACCTGG TCGCCGTGAT GCTCGTGGTG TTCCTGGTCG GCGTGTTCGG GCTGAACTTC CACGTGTCGC TGGCGCTGCT GGCCAGCGAC ACCTTCGGCG GCGACGCCGA CGCGTACGGG CTGCTCACCA CGACCATGGC GGTGGGCACG CTGGCGGGCG CGGCGATGGC GGCCAGGCGG TCCGCGCCGG GGCCCCGGCT GCTGGTGGGC GGCGCGGCGG CGTTCGGGGT GCTGGAGCTG CTGTCCGGGC TGATGCCGAC GATGCTCACG GCGGCGCTCG CGCTGATCCC GGTCGGCGCG GCGATGATGA CGTTCACGAC CACCGCGAAC TCGACCGTGC AGCTCGCCGT CGCGCCCGGG ATGCGGGGGC GGGTGATGGG CGTTTACATG ACGGTGTTCA TGGGGAGCGC TCCGCTGTCC GGGCTGCTCA CCGGCTGGGT GGCCGACCGG TTCGACGCCC GCGCGCCGCT GGTGCTGGGC GGCGCGGTGT CGGTGCTGGC CGCGCTGCTC GGGGCGCTCG TCCTGGCGCG GGCGAACCGG ATGGGGGACA CCTCTTCCCA AAACAGTGAA GTTAGGCTAA CCTAA
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Protein sequence | MTATGAPPAP RRAGAFSSLR LRNYRLYASG QLVSLVGLWM ERVAQDWLVL QLSGGDPIAL GVATALQFGP VLALSMWAGV LADRLDKRLL LIGLQSGMAV LALVLGLVDL SGVAQLWHVY LLCLAGGVLS AVEAPVRQSF AVEMVGREQV ANAVALNSMT FNAARMIGPA VAGGLIVVVG TGWIFLIRAA SFAGVLAGLA LMRAAELHRG APVAKARGQL AEGLRYLRGR PDLVAVMLVV FLVGVFGLNF HVSLALLASD TFGGDADAYG LLTTTMAVGT LAGAAMAARR SAPGPRLLVG GAAAFGVLEL LSGLMPTMLT AALALIPVGA AMMTFTTTAN STVQLAVAPG MRGRVMGVYM TVFMGSAPLS GLLTGWVADR FDARAPLVLG GAVSVLAALL GALVLARANR MGDTSSQNSE VRLT
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