Gene Amir_0491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0491 
Symbol 
ID8324650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp529828 
End bp531102 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content74% 
IMG OID644941035 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003098304 
Protein GI256374644 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCGA CCGGCGCGCC CCCGGCCCCG CGGCGGGCCG GGGCGTTCTC CTCGCTGCGC 
TTGCGCAACT ACCGGCTCTA CGCCTCCGGC CAGCTCGTCT CGCTGGTCGG GCTGTGGATG
GAGCGGGTCG CGCAGGACTG GCTGGTGCTC CAGCTGTCCG GCGGCGACCC GATCGCGCTG
GGCGTGGCCA CGGCCCTGCA GTTCGGCCCG GTGCTGGCGC TGTCCATGTG GGCGGGCGTG
CTGGCCGACC GGTTGGACAA GCGCCTGCTG CTGATCGGCC TCCAGTCCGG CATGGCGGTG
CTCGCGCTGG TGCTCGGCCT GGTCGACCTG TCCGGGGTCG CGCAGCTGTG GCACGTGTAC
CTGCTGTGCC TGGCGGGCGG CGTGCTGTCC GCCGTGGAGG CCCCGGTGCG GCAGTCGTTC
GCGGTGGAGA TGGTCGGCCG CGAGCAGGTC GCGAACGCGG TCGCGCTCAA CTCGATGACG
TTCAACGCCG CCCGGATGAT CGGCCCGGCC GTGGCGGGCG GGCTGATCGT GGTGGTCGGC
ACCGGCTGGA TCTTCCTGAT CCGCGCGGCG AGCTTCGCGG GCGTGCTGGC CGGGCTCGCC
CTGATGCGGG CCGCCGAGCT GCACCGGGGC GCGCCGGTGG CCAAGGCCAG GGGGCAGCTC
GCCGAGGGGC TGCGCTACCT GCGCGGCAGG CCGGACCTGG TCGCCGTGAT GCTCGTGGTG
TTCCTGGTCG GCGTGTTCGG GCTGAACTTC CACGTGTCGC TGGCGCTGCT GGCCAGCGAC
ACCTTCGGCG GCGACGCCGA CGCGTACGGG CTGCTCACCA CGACCATGGC GGTGGGCACG
CTGGCGGGCG CGGCGATGGC GGCCAGGCGG TCCGCGCCGG GGCCCCGGCT GCTGGTGGGC
GGCGCGGCGG CGTTCGGGGT GCTGGAGCTG CTGTCCGGGC TGATGCCGAC GATGCTCACG
GCGGCGCTCG CGCTGATCCC GGTCGGCGCG GCGATGATGA CGTTCACGAC CACCGCGAAC
TCGACCGTGC AGCTCGCCGT CGCGCCCGGG ATGCGGGGGC GGGTGATGGG CGTTTACATG
ACGGTGTTCA TGGGGAGCGC TCCGCTGTCC GGGCTGCTCA CCGGCTGGGT GGCCGACCGG
TTCGACGCCC GCGCGCCGCT GGTGCTGGGC GGCGCGGTGT CGGTGCTGGC CGCGCTGCTC
GGGGCGCTCG TCCTGGCGCG GGCGAACCGG ATGGGGGACA CCTCTTCCCA AAACAGTGAA
GTTAGGCTAA CCTAA
 
Protein sequence
MTATGAPPAP RRAGAFSSLR LRNYRLYASG QLVSLVGLWM ERVAQDWLVL QLSGGDPIAL 
GVATALQFGP VLALSMWAGV LADRLDKRLL LIGLQSGMAV LALVLGLVDL SGVAQLWHVY
LLCLAGGVLS AVEAPVRQSF AVEMVGREQV ANAVALNSMT FNAARMIGPA VAGGLIVVVG
TGWIFLIRAA SFAGVLAGLA LMRAAELHRG APVAKARGQL AEGLRYLRGR PDLVAVMLVV
FLVGVFGLNF HVSLALLASD TFGGDADAYG LLTTTMAVGT LAGAAMAARR SAPGPRLLVG
GAAAFGVLEL LSGLMPTMLT AALALIPVGA AMMTFTTTAN STVQLAVAPG MRGRVMGVYM
TVFMGSAPLS GLLTGWVADR FDARAPLVLG GAVSVLAALL GALVLARANR MGDTSSQNSE
VRLT