Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0432 |
Symbol | |
ID | 8324591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 466404 |
End bp | 468608 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644940976 |
Product | Microtubule-severing ATPase |
Protein accession | YP_003098245 |
Protein GI | 256374585 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0369558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCACCC TGACCGCGAG GCTCTCCCCA TCCGCGCTGG ACACCCGCCG CGGTGTCGTC CGGATGCACC GCGAAGTCCT GGACGCGCTC GGCCTGCGCC AGTGGGACGC GGTCCGCCTC ACCGGCGCGC GGGTCAGCGC GGCCCTCGCC GCCGCGGCCC CCGACGGCAG CCCCGTCGGC GTGGTGCTGG TCGACGACAT CACCCTCTCC AACCTCGGCG TCACCGAGGG CGCGGAGCTC GTCGTCACCC CCGTCGAGGT GTCCGCCGCT CGCACCATCA CCGTCGCGGG CTCCCGCCTG GCCAGCACCG CGCTCACCCC GGAGACCCTC CGGATGGCGC TCACCGGCAA GGTCCTCACG GTCGGCGACG CGGTGTCCCT GCTCCCGCAG GACCTGGCCC CGCCGCCCGG CGCCGACGTC TCGGCCACCC GCCGCAAGCT GTCCGCCGCC ATCGGCACGA CCTGGACCAA CGAGCTGCTC ACCATCACCT CCGCCGACCC CGGCGGCGTG GTGGCCGTGC GCCCCTCCAC GCTCGTGGCC TGGCGCGACG CGACCGCCCC CGCCCCGGCG CAGGCCGCCC CGCCCGCCGT CGACGCGGGC ATCACCCCGG TCACCCCGCC GCCCCCGCCC GCCGAGGCGC TCCCGGTCGC CGACCTGGTC GGCCAGCAGG ACGCCGCCCG CCGCCTCGCC GAGTGGCTCG ACCTCGTCCT CACCCAGCCG GAGCTGCTCA CCAGGCTCGG CGCGGCCCCC AGGCTCGCCG CGCTGGTCAG CGGCCCCGAG GGGGTCGGCA AGGCGACCCT GGTGCGGGCC GTGGCGCACG CGGCGGGCAC GCGCGTGGTC GAGGTGTCCG CGCCCGCGAT CGCCGTGCTG GAGGCCAACG CCACCGCGCG CGCCCTCGCC GACGCCATCA CCCAGGCCCA GTCCCAGCCC GGTTCCCCGG CGGTGCTCGT GCTCACCGAC GTGGAGGCGC TGCTGCCCGC CGCCACCCCG CCCCCGGTGG CCACGGTCGT GCTCGACGCC CTGCGCGCCG CGCTCGCCGC CACCCCGCTC GTGGTCACCA GCGCCAGCCC GGAGCTGATC GACCCGCGCC TGCGCGTCCC CGACCTGGTC GACCGCGAGC TGGTGCTGCC CCTGCCCGAC GGCGCGACCC GCCGCGAGCT GCTGCGCGCG CTGCTGCGCG AGGTGCCCCT CGAACCGGAC GTGGACCTGG CCGAGGTCGC CGACCGCACC CCCGGCTTCG TCGCCGCCGA CCTGGTGGCG GTGCGCCGCG AGGCCGCCGT CCGCTCCGCG CTGCGCCAGC GCCAGGAGGC CGAGCCGCGC GTCGCGCAGG AGGACCTCCT CGGCTCGCTG GACACCGTCC GCCCGATCTC CATGTCCACC TCGGACACCC TGCGCACCGG CGGCCTGACC CTGGACGACG TCGGCGACAT GGCCGAGGTC AAGCAGGCGC TGACCGAGGC CGCGCTGTGG CCGCTCCAGT ACCCGGACTC GTTCGCCCGC CTCGGCGTCG AGCCCCCGCG CGGCCTGCTC CTGTACGGCC CGCCCGGCTG CGGCAAGACG TTCCTGGTCC GCGCGCTGGC CGGGACGGGC AAGCTGAACG TGCTGTCGGT CAAGGGCGCC GAGCTGATGG ACAAGTTCGT CGGCGAGTCC GAGCGCGCGG TCCGCGAGCT GTTCCGCAGG GCCGCCGAGG CCGCGCCCGC GCTGGTGTTC CTGGACGAGG TGGACGCGCT GGCCCCGCGC CGGGGCCAGT CCTCGGACTC GGGCGTCGCG GACCGCGTGG TCGCCGCGCT GCTGACCGAG CTGGACGGCG TGGAGCCGCT GCGCGACGTG ATCGTGCTGG GCGCGACGAA CCGCCCGGAG CTGGTCGACC CGGCCCTGCT GCGACCGGGC AGGCTGGAGC GCCTGGTCTA CGTGCCGCCG CCGGACGCCG AGGCCCGCGT GGAGATCCTG CGCTCCGCGT CCCGCAACAC CCCGCTCGCG GAGGACGTCG AGCTGACCGC GCTGGCGGAC GACCTCGACG GCTACTCGGC GGCGGACTGC GCCGCGCTGA TCCGCGAGGC GGCGCTGACC GCGATGCGCG AGTCCCTGTC GGCGACCGCC GTGACGGCGG AGCACCTGGC GAAGGCGCGC GGGGTCGTGC GCCCGTCGCT GGACCCGGCG CAGCTGGCGT CGCTGGCGGC CTACGCGGAG TCCAGGAAGG CCTGA
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Protein sequence | MITLTARLSP SALDTRRGVV RMHREVLDAL GLRQWDAVRL TGARVSAALA AAAPDGSPVG VVLVDDITLS NLGVTEGAEL VVTPVEVSAA RTITVAGSRL ASTALTPETL RMALTGKVLT VGDAVSLLPQ DLAPPPGADV SATRRKLSAA IGTTWTNELL TITSADPGGV VAVRPSTLVA WRDATAPAPA QAAPPAVDAG ITPVTPPPPP AEALPVADLV GQQDAARRLA EWLDLVLTQP ELLTRLGAAP RLAALVSGPE GVGKATLVRA VAHAAGTRVV EVSAPAIAVL EANATARALA DAITQAQSQP GSPAVLVLTD VEALLPAATP PPVATVVLDA LRAALAATPL VVTSASPELI DPRLRVPDLV DRELVLPLPD GATRRELLRA LLREVPLEPD VDLAEVADRT PGFVAADLVA VRREAAVRSA LRQRQEAEPR VAQEDLLGSL DTVRPISMST SDTLRTGGLT LDDVGDMAEV KQALTEAALW PLQYPDSFAR LGVEPPRGLL LYGPPGCGKT FLVRALAGTG KLNVLSVKGA ELMDKFVGES ERAVRELFRR AAEAAPALVF LDEVDALAPR RGQSSDSGVA DRVVAALLTE LDGVEPLRDV IVLGATNRPE LVDPALLRPG RLERLVYVPP PDAEARVEIL RSASRNTPLA EDVELTALAD DLDGYSAADC AALIREAALT AMRESLSATA VTAEHLAKAR GVVRPSLDPA QLASLAAYAE SRKA
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