| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0427 |
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| Symbol | |
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| ID | 8324586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 462297 |
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| End bp | 462884 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644940971 |
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| Product | peptide deformylase |
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| Protein accession | YP_003098240 |
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| Protein GI | 256374580 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.62292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTAC ACCCCATCCG GATCGCGGGC GACCCGGTCC TGCACAACCC GACCCGTCCC
GTGGACGAGC ACGACGACGA GCTCAGGGCG CTCATCGCGG ACATGTACGA GACGATGGCC
GCCGCCAACG GCGTCGGCCT CGCGGCCAAC CAGATCGGCG TGGACCTCCG GCTGTTCGTC
TACGACTGCC CGGACGACGA GGGGGTGCGG CGCCGGGGCG AGGTGGTGAA CCCGGTGCTC
CAGACCTCGG ACGTCCCGCT GGGGATGCCG GACCCGGACG ACGACTACGA GGGCTGCCTC
TCGGCGCCCG GCGAGTCCTA CCCGACCGGG CGCGCGTCCT GGGCGAAGGT CACCGGGACC
GACGGGAACG GGGACCCGGT GGAGGTCGAG GGGACCGGGT TCTTCGCCCG GTGCCTCCAG
CACGAGACGG ACCACCTGGA CGGGTACCTG TACCTGGACC GGCTGGTGGG TCGGCACAAG
CGGGCCTCCA AGAAGATGAT CAAGGCCAAC GGGTGGGGCG TCCCTGGGCT GTCCTGGGAC
CCGGCCACCT CGGAGGACCC GTTCGCGGAC GACGAGGACG AGGACTGA
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| Protein sequence | MAVHPIRIAG DPVLHNPTRP VDEHDDELRA LIADMYETMA AANGVGLAAN QIGVDLRLFV
YDCPDDEGVR RRGEVVNPVL QTSDVPLGMP DPDDDYEGCL SAPGESYPTG RASWAKVTGT
DGNGDPVEVE GTGFFARCLQ HETDHLDGYL YLDRLVGRHK RASKKMIKAN GWGVPGLSWD
PATSEDPFAD DEDED
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