| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0425 |
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| Symbol | |
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| ID | 8324584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 459516 |
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| End bp | 461159 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644940969 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_003098238 |
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| Protein GI | 256374578 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.912132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGCAC TCGGGGACGG CTCGGTCAGG CCGAGCGTCA CCACCGGGCC GATCCGGGGG
TCCCGCAAGG TCCACCGCGA CGCGGAGGAC GGCGTGCGGG TCCCGTTCCG CAGGGTCGAG
CTCACCGACG GCGACCACTT CGACCTGTAC GACACCTCCG GGCCTTACAC GGCCGGGGAC
GTCGACGTGC GCGAGGGACT GGAGAAGATC CGCGCCGGCT GGATCTCGGC GCGCGAGCCC
GTGAACGGGG CAGCCACCCA GCTGGCCTGG GCGCGGGCGG GCGTGATCAC CCCGGAGATG
CGGTTCGCGG CGCTGCGCGA GTCGCTGGCG CCGGAGTTCG TGCGCGACGA GGTCGCCGCG
GGGCGCGCGG TGATCCCGGC CAACCGCAAC CACCCGGAGT CCGAGCCGAT GGTCATCGGC
AAGGGGTTCC TGGTGAAGGT CAACGCCAAC ATCGGCAACT CGGCGGTGAC CTCGTCCGTC
GAGGAGGAGG TGGAGAAGAT GGTGTGGGCG ACCCGCTGGG GCGCCGACAC CGTGATGGAC
CTGTCGACCG GCAAGCGCAT CCACGAGACC CGCGAGTGGA TCATCCGCAA CTCGCCGGTC
CCCGTGGGGA CGGTGCCGAT CTACCAGGCG CTGGAGAAGG TCGGCGGGGA TCCGGCCGCG
CTGTCCTGGG AGGTGTACCG GGACACCGTC GTGGAGCAGG CCGAGCAGGG CGTGGACTAC
ATGACGGTGC ACGCGGGCGT GCTGCTGCGG TACGTGCCGC TGACGGCGCG GCGGGTCACC
GGGATCGTCT CGCGCGGCGG CTCGATCATG GCCGCGTGGT GCCTGGCGCA CCACGAGGAG
AGCTTCCTGT ACACCCGGTT CGCCGAGCTG TGCGAGATCC TGCGCCAGTA CGACGTGACG
TTCTCGCTGG GCGACGGGCT GCGGCCGGGG TCGATCGCGG ACGCCAACGA CGAGGCCCAG
TTCGCCGAGC TGCGCACCCT GGGCGAGCTG GCGCGGGTGG CCAGGGCGCA CGACGTGCAG
GTGATGATCG AGGGGCCCGG CCACGTGCCG CTGCACAAGA TCGCGGAGAA CGTGCGGCTG
GAGCAGGAGT GGTGCGACGG CGCGCCGTTC TACACGCTCG GCCCGCTGGC CACCGACGTC
GCGCCCGCCT ACGACCACAT CACGTCGGCG ATCGGCGCGG CGCAGATCGG GGCGCTCGGC
ACGGCCATGC TCTGCTACGT GACCCCGAAG GAGCACCTGG GGCTGCCGGA CCGGGACGAC
GTGAAGACCG GCGTGATCAC GTACAAGATC GCCGCGCACG CCGCCGACCT CGCCAAGGGC
CACCCCGGCG CGCAGGCGTG GGACGACGCG CTGTCCAGGG CCAGGTTCGA GTTCCGCTGG
GAGGACCAGT TCAACCTCTC GCTCGACCCG GACACCGCGC GCGAGTTCCA CGACCGGACG
CTCCCGGCGG AGCCCGCGAA GACGGCGCAC TTCTGCTCGA TGTGCGGGCC GAAGTTCTGC
TCGATGCGGA TCACGCAGGA CGTGCGGCGC TACGCTGAGG AGCGGGGTCT GTCCACTGTG
GAAGCGATTG AGGCGGGTAT GGCCGAGAAG GCGCACGAGT TCGACGACCG GGGCGGCAAG
GTCTACCTGC CGGTCGTGGA CTGA
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| Protein sequence | MTALGDGSVR PSVTTGPIRG SRKVHRDAED GVRVPFRRVE LTDGDHFDLY DTSGPYTAGD
VDVREGLEKI RAGWISAREP VNGAATQLAW ARAGVITPEM RFAALRESLA PEFVRDEVAA
GRAVIPANRN HPESEPMVIG KGFLVKVNAN IGNSAVTSSV EEEVEKMVWA TRWGADTVMD
LSTGKRIHET REWIIRNSPV PVGTVPIYQA LEKVGGDPAA LSWEVYRDTV VEQAEQGVDY
MTVHAGVLLR YVPLTARRVT GIVSRGGSIM AAWCLAHHEE SFLYTRFAEL CEILRQYDVT
FSLGDGLRPG SIADANDEAQ FAELRTLGEL ARVARAHDVQ VMIEGPGHVP LHKIAENVRL
EQEWCDGAPF YTLGPLATDV APAYDHITSA IGAAQIGALG TAMLCYVTPK EHLGLPDRDD
VKTGVITYKI AAHAADLAKG HPGAQAWDDA LSRARFEFRW EDQFNLSLDP DTAREFHDRT
LPAEPAKTAH FCSMCGPKFC SMRITQDVRR YAEERGLSTV EAIEAGMAEK AHEFDDRGGK
VYLPVVD
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