Gene Amir_0364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0364 
Symbol 
ID8324522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp394663 
End bp395151 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content66% 
IMG OID644940909 
Producttranscriptional regulator, CarD family 
Protein accessionYP_003098179 
Protein GI256374519 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.376987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTTCA AGGTCGGAGA GACCGTCGTC TACCCGCACC ACGGTGCCGC TCTCATCGAA 
GCGATCGAGA CCCGCGTGAT CAAGGGCGAG GAGAAGAAGT ACCTCGTCCT CAAGGTCGCC 
CAGGGCGACC TCACCGTCCG CGTCCCCGCA GACAACGCCG AGATCGTAGG CGTGCGCGAC 
GTGGTCGGCC AAGAGGGTCT GGACAAGGTC TTCGAGGTGT TGCGCGCTCC CCACACCGAG 
GAGCCGACCA ACTGGTCGCG GCGGTACAAG GCCAACCTGG AGAAGCTCGC GTCCGGTGAC 
GTGAACAAGG TGGCCGAAGT GGTGCGTGAC CTCTGGCGGC GCGAGAAGGA CCGCGGGCTG 
TCGGCGGGCG AGAAGCGGAT GCTGGCGAAG GCCCGGCAGA TACTGGTCAG CGAACTGGCG 
CTGGCCGAGG GCACCGACGA GGACAAGGCC GAGGTCCTCC TCGACGAGGT CCTCGCCACC 
GCGTCCTGA
 
Protein sequence
MVFKVGETVV YPHHGAALIE AIETRVIKGE EKKYLVLKVA QGDLTVRVPA DNAEIVGVRD 
VVGQEGLDKV FEVLRAPHTE EPTNWSRRYK ANLEKLASGD VNKVAEVVRD LWRREKDRGL 
SAGEKRMLAK ARQILVSELA LAEGTDEDKA EVLLDEVLAT AS