Gene Amir_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0352 
Symbol 
ID8324510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp382167 
End bp383057 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content70% 
IMG OID644940897 
Productperiplasmic solute binding protein 
Protein accessionYP_003098167 
Protein GI256374507 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTGC GCACCACGCT GATCACCGCC GTGGCGGTGC TCGGTCTCAC CACCGCCTGC 
GGCAGCGCCG ACCAGGGCGG AAGCGGCTCC TCCGACGCCC CCGCCGGCGC GGTCCCCGTC
GTCACCTCCA CCAACGTGTG GGGCAGCGTC GTCAAGGCGG TCGGCGGGGA CGCCGTCCAG
GTCAAGGCCC TGATCGACGA CCCGTCCGCC GACCCGCACT CGTTCGAGAG CAAGCCCGCC
GACATCGCCG CGGTCGCGGA CGCCAAGCTC GTCGTCGGCA ACGGCGGCGG CTACGACGAC
TTCTTCGACA AGATCGTCGA CGAGTCCGCC CGGTCGGCCA AGCGCGTCGA CGCCTTCGCC
CTCTCGGGCA AGGAGGAGAA CGAGCACGTC TGGTACGACC TGGCCACCGT CCGCAAGGTC
GCCGACAAGG TCGCCGAGGA GCTCTCCGCG ATCGCCCCGG ACAAGAAGGA CGCCTTCACC
AAGGGCGCGG CCGACTTCGG CACGGCGCTC GACGGCCTCA CCGCCAAGGC GGAGCGGATC
AAGCCCGCCA AGGTCGTCGT GACCGAGCCG GTGCCCGCCT ACCTGCTGGA GACCGCGGGA
GTCGAGGACC TCACCCCGGC CGAGTTCACC GAGGCCATCG AGAACGAGAC CGACGTCCCC
GTCGCCGCCA TCGCCGCCAC CGGTGACCTG ATCGTGAACA AGCAGGTCAA CGCGCTGATC
AACAACACCC AGACGGAGAA CGCGGTCACG GGCGACCTGG TCGCCAAGGC CGGGACCGCC
GGGCTGCCCG TCGTGGGGAT GACCGAGACG CTGCCGGAAG GCGTCACGGG TTACGTTGAG
TGGATGACGA AGCAGGTCGA CGAGCTGACC GCCGCGCTCG GGACGAAATG A
 
Protein sequence
MTVRTTLITA VAVLGLTTAC GSADQGGSGS SDAPAGAVPV VTSTNVWGSV VKAVGGDAVQ 
VKALIDDPSA DPHSFESKPA DIAAVADAKL VVGNGGGYDD FFDKIVDESA RSAKRVDAFA
LSGKEENEHV WYDLATVRKV ADKVAEELSA IAPDKKDAFT KGAADFGTAL DGLTAKAERI
KPAKVVVTEP VPAYLLETAG VEDLTPAEFT EAIENETDVP VAAIAATGDL IVNKQVNALI
NNTQTENAVT GDLVAKAGTA GLPVVGMTET LPEGVTGYVE WMTKQVDELT AALGTK