Gene Amir_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0333 
Symbol 
ID8324491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp362408 
End bp363256 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content73% 
IMG OID644940878 
ProductABC transporter related 
Protein accessionYP_003098148 
Protein GI256374488 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACGG CACCCCCGTC CCCCAGCGCG CGCCTGCGCG CCCACGAGCT GTCGATCGGC 
TACGGCGACC GGGTGATCGT CGACCGGCTC GACCTGGACG TGCTCGACGG CGCCGTCACC
GCCGTCATCG GCCCCAACGG CTGCGGCAAG TCCACGATGC TGCGCGCGCT CGCCCGCCTG
CTGCCCACCA GGGGCGGGCA GGTCCTGCTC GACGGCAGGC CGATCACCGA GGTGCCCACC
CGCGAGGTGG CCAAGGTGCT CGGGATGCTG CCGCAGACCC CGCAGGGCCC CGAGGGGTTG
ACCGTGGCCG ACCTGGTCGC CAGGGGCAGG CACCCGCACC AGGCCTGGTA CCGGCAGTGG
TCCGGCGACG ACGAGGCCGC CGTCGCCGAG GCGCTGCGGC TGACCGGCAT GGAGGACTTC
GCCGAGCGCA CCCTCGACCA GCTCTCCGGC GGCCAGCGCC AGCGCGCCTG GATCTCCATG
GCGCTCGCCC AGGGCACCGA CCTGCTGCTG CTCGACGAGC CCACGACCTA CCTGGACCTC
GCGCACCAGA TCGACGTGCT GGACCTGGTG CGGCTGCTGC ACGCCGAGGG CGGGCGCACG
ATCGTCATGG TGCTGCACGA CCTGAACCTC GCCGCCCGCT ACGCCGACCA CCTGGTGGCC
ATGAAGGACG GTCGGATCGT GGTGCAGGGC GCGCCGTCCG AGGTGCTGAC CGAGCAGGTG
CTCAAGGAGG TCTTCGGGCT GGAGGCCGCC GTCATCGAGG ACCCGGTCGC GGGCACCCCG
ATGGTGGTGC CGATCCGGTC CACGACGCAC GCGGCGGCCA ACCGCAGGAA AGACCACCCG
AAGGGCTGA
 
Protein sequence
MTTAPPSPSA RLRAHELSIG YGDRVIVDRL DLDVLDGAVT AVIGPNGCGK STMLRALARL 
LPTRGGQVLL DGRPITEVPT REVAKVLGML PQTPQGPEGL TVADLVARGR HPHQAWYRQW
SGDDEAAVAE ALRLTGMEDF AERTLDQLSG GQRQRAWISM ALAQGTDLLL LDEPTTYLDL
AHQIDVLDLV RLLHAEGGRT IVMVLHDLNL AARYADHLVA MKDGRIVVQG APSEVLTEQV
LKEVFGLEAA VIEDPVAGTP MVVPIRSTTH AAANRRKDHP KG