| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0306 |
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| Symbol | |
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| ID | 8324464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 332537 |
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| End bp | 334204 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644940851 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003098121 |
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| Protein GI | 256374461 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.509937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGAGA CGACAACCCA GGCGGGAGCG ACGCCACCCG GCGCCGCACT GCTGACCCAC
CGGCAGATCC TGACGATCCT GTCCGGGCTG CTCATGGGCA TGTTCCTGGC CGCGCTCGAC
CAGATGATCG TCGCGACGGC CATGAAGACC ATCGCGGACC ACCTGAACGG GCAGACCATC
CAGGCCTGGG CGACCACCGC CTACCTGATC ACGTCGACGA TCACGACGCC GCTGTACGGC
AAGCTGTCGG ACATCTACGG CCGCAAGCCG ATGTACCTCA CCGCGATCTC GATGTTCCTG
GTCGGCTCGC TGCTGTGCGG CATCGCCAAC TCGATGTACG AGCTGGCCGC GTTCCGCGCG
GTCCAGGGCC TCGGCGCGGG CGGCCTCATG TCGCTGGCGT TCGCGATCCT GGCCGACATC
ACCTCGCCGC GCGAGCGCAG CCGGTACGCG GGCTACTTCA TGGCCGTCTT CGGCGTCGCC
AGCGTCGCGG GCCCGGTCGT CGGCGGCCTG TTCGCGGGCA TGGACCACTT CCTCGGCTTC
GCGGGCTGGC GCTGGGTGTT CCTGGTGAAC GTCCCGATCG CGCTCGCCGC GCTGGCCGTC
GTCGCCAAGG TCCTCAACAT CCCGCACCAG CGGGTCGACC ACCGCGTCGA CTTCCTCGGC
GCGATCACGC TGACCGTCGG CCTGGTGCCG CTGCTGATCG TGGCCGAGCA GGGCCGCGAG
TGGGGCTGGG GCTCGGCCAC CGCGATCGCC ATGTACGTCG TCGGCGTGCT CGGCCTGGTG
GCGTTCGTGT GGGCGGAGAA GCGCGCGGGC GACGAGGCGC TGCTGCCGCT GAGGCTGTTC
CGCAAGCAGA CCTTCGCGCT CGGCAACACG ATCAACTTCG TGCTCGGCGC GGGCATGTTC
GGCGGCATGG TCTCCATCCC GCTGTACCTG CAGATCGTGC AGGGCCACTC GGCCACCACG
GCGGGCCTGA TGATGCTGCC GATGACCCTC GGCATCATGA CCGCGGCGGG CACCAGCGGC
AAGATCACCT CGAAGACCGG CCGCTACAAG GTGTTCCCGG TCGTCGGCTT CGCGGTCATG
ACCGCGTCGC TGTTCCTGTT CAGCACGGTC GGCGTGGACA CCGCGACCTG GCAGCCGATG
GCGCTGATGT TCACCATGGG CCTCGGCCTG GGCCTGTGCA TGCAGACCCT GCTCATCGCG
ATCCAGAACG ACGCCGAGCC CCGCGACATG GGCGTGGCGA CCTCGTCGGC CACGTTCTTC
CGGCAGATCG GCGGCACGGT CGGCGCCGCG GTGTTCCTGT CCGTCCTGTT CAGCACGGTC
GGCGACAAGA TCGGCGAGGC GCTGCGCTCG GCCATGGGCA CCGACGCGTT CCGCGCCGCG
CTCGCCCGAC CCGAGAACCA GGCGTTCGCG CAGCAGCTCC AGAGCGGCGG CGCGTCGGCG
GACCTGAACA ACACCGAGTT TCTGTCCAAG CTGGACCCGG TGCTGGCCAG GCCGTTCCTG
GAGGGCTTCT CCTCGGCGAT CGACACGGTG TTCTTCGTGG GCGCCCTCGT GACCCTGGTC
GGGTTCGCGA TCGTGTGGTT CCTGCGCGAG GTGCCGCTGT CGGACCGCTC GGGCCTGGAG
CGCTCGAAGG ACGAGGCCGA CGCCGCGTCG ACCATCGCCC TGCACTGA
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| Protein sequence | MSETTTQAGA TPPGAALLTH RQILTILSGL LMGMFLAALD QMIVATAMKT IADHLNGQTI
QAWATTAYLI TSTITTPLYG KLSDIYGRKP MYLTAISMFL VGSLLCGIAN SMYELAAFRA
VQGLGAGGLM SLAFAILADI TSPRERSRYA GYFMAVFGVA SVAGPVVGGL FAGMDHFLGF
AGWRWVFLVN VPIALAALAV VAKVLNIPHQ RVDHRVDFLG AITLTVGLVP LLIVAEQGRE
WGWGSATAIA MYVVGVLGLV AFVWAEKRAG DEALLPLRLF RKQTFALGNT INFVLGAGMF
GGMVSIPLYL QIVQGHSATT AGLMMLPMTL GIMTAAGTSG KITSKTGRYK VFPVVGFAVM
TASLFLFSTV GVDTATWQPM ALMFTMGLGL GLCMQTLLIA IQNDAEPRDM GVATSSATFF
RQIGGTVGAA VFLSVLFSTV GDKIGEALRS AMGTDAFRAA LARPENQAFA QQLQSGGASA
DLNNTEFLSK LDPVLARPFL EGFSSAIDTV FFVGALVTLV GFAIVWFLRE VPLSDRSGLE
RSKDEADAAS TIALH
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