Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0251 |
Symbol | |
ID | 8324408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 273605 |
End bp | 274702 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 644940795 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_003098066 |
Protein GI | 256374406 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACCTCA CCGCCACCAC CTCGGAACTG GCCTCCGCCG TCGCCGACGT CGCCCGCCTG CTGCCCGGCC GCGTGCTCGA CCCCGTGCTG GCGGGCGTCG TGCTGCGGGC CGGGCCGGGC GGGGTGGAGC TGTCGGGCAG CGACCGGGAG CGGTCGCTGC GGCTGAGCCG GGCGGCCACC ACGCACTCCG AGGGGGCCGC GCTGGTGCCC GCGAAGCCGC TGGCCGAGAC GCTGCGGGCG CTGGAGTCCC CGCAGGTGCG GCTGGTGGTG GAGGGGTCGC GGCTGGCCGT GCGCACGGGG GCGGCGCGGT TCGCGCTGCC GCTGCTGGAG CTGGGGGACC ACCCAGGGGT TCCGGAGCTG CCGCCGGTGG CCGGTTCCGC GCCCGCCGGG GCGTTCGCCT CGGCGCTGGC GGCGGTGGCC ACGGCGGCGT CCAAGGACGA CGCGCTGCCG GTGTTCACGG GCGTGCGGGT GCACGCGGCC GGGGACCGGC TGGAGCTGAT CACCTCGGAC CGGTACCGGC TGGGGTTCGC GTCGGTGCCG TGGGCGGGCG GGGCGCTGGA CGCGCTGGCC CCGGCCGTGC AGCTGGCCGA GGTGGCGAAG CAGGCCGCGC GGGACGAGCG GGTGGAGCTG CGCGCCGACG CGGACCGGTT GGCCCTGGCC TGGGGCGGCG GGAGCGCCAG CACGGCGCTG CTGGCCGCGC CGTTCCCGGA CGAGCGGGCG CGGAAGCTGC TGGCCGCCGA GGGCGAGTGC ACGGTGGTGC TGGAGGCGGA CGAGCTGGCC GGGGCGGTGC GCCGGGCCGC GCCGTACTCG GGGGCGCACG GGGCCGTGCA GCTGGCGGCC GAGGACGGGG AGCTGCGGGT GCGGGGCAGC GACCCGCAGG CCGGGGAGTC GAGCGAGTCG GTGAAGGCGT CGGTCAGCGG CGGGCTGCTG ACCAGGAGCT TCCAGGTCCG GTACCTGTCG GACGCGCTGC GGGCGTTCGC GGGGCGGCGG GTGGAGCTGC GGGTGCAGTC GGGGCTGCGG TCGACCGTGC TGACGGCCGA GGAGGACACG AGCGGGGTGC GGTTGACGTA CCTCGTGGTG CCGCTGCGGA CGCCCTGA
|
Protein sequence | MDLTATTSEL ASAVADVARL LPGRVLDPVL AGVVLRAGPG GVELSGSDRE RSLRLSRAAT THSEGAALVP AKPLAETLRA LESPQVRLVV EGSRLAVRTG AARFALPLLE LGDHPGVPEL PPVAGSAPAG AFASALAAVA TAASKDDALP VFTGVRVHAA GDRLELITSD RYRLGFASVP WAGGALDALA PAVQLAEVAK QAARDERVEL RADADRLALA WGGGSASTAL LAAPFPDERA RKLLAAEGEC TVVLEADELA GAVRRAAPYS GAHGAVQLAA EDGELRVRGS DPQAGESSES VKASVSGGLL TRSFQVRYLS DALRAFAGRR VELRVQSGLR STVLTAEEDT SGVRLTYLVV PLRTP
|
| |