Gene Amir_0251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0251 
Symbol 
ID8324408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp273605 
End bp274702 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content79% 
IMG OID644940795 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_003098066 
Protein GI256374406 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCTCA CCGCCACCAC CTCGGAACTG GCCTCCGCCG TCGCCGACGT CGCCCGCCTG 
CTGCCCGGCC GCGTGCTCGA CCCCGTGCTG GCGGGCGTCG TGCTGCGGGC CGGGCCGGGC
GGGGTGGAGC TGTCGGGCAG CGACCGGGAG CGGTCGCTGC GGCTGAGCCG GGCGGCCACC
ACGCACTCCG AGGGGGCCGC GCTGGTGCCC GCGAAGCCGC TGGCCGAGAC GCTGCGGGCG
CTGGAGTCCC CGCAGGTGCG GCTGGTGGTG GAGGGGTCGC GGCTGGCCGT GCGCACGGGG
GCGGCGCGGT TCGCGCTGCC GCTGCTGGAG CTGGGGGACC ACCCAGGGGT TCCGGAGCTG
CCGCCGGTGG CCGGTTCCGC GCCCGCCGGG GCGTTCGCCT CGGCGCTGGC GGCGGTGGCC
ACGGCGGCGT CCAAGGACGA CGCGCTGCCG GTGTTCACGG GCGTGCGGGT GCACGCGGCC
GGGGACCGGC TGGAGCTGAT CACCTCGGAC CGGTACCGGC TGGGGTTCGC GTCGGTGCCG
TGGGCGGGCG GGGCGCTGGA CGCGCTGGCC CCGGCCGTGC AGCTGGCCGA GGTGGCGAAG
CAGGCCGCGC GGGACGAGCG GGTGGAGCTG CGCGCCGACG CGGACCGGTT GGCCCTGGCC
TGGGGCGGCG GGAGCGCCAG CACGGCGCTG CTGGCCGCGC CGTTCCCGGA CGAGCGGGCG
CGGAAGCTGC TGGCCGCCGA GGGCGAGTGC ACGGTGGTGC TGGAGGCGGA CGAGCTGGCC
GGGGCGGTGC GCCGGGCCGC GCCGTACTCG GGGGCGCACG GGGCCGTGCA GCTGGCGGCC
GAGGACGGGG AGCTGCGGGT GCGGGGCAGC GACCCGCAGG CCGGGGAGTC GAGCGAGTCG
GTGAAGGCGT CGGTCAGCGG CGGGCTGCTG ACCAGGAGCT TCCAGGTCCG GTACCTGTCG
GACGCGCTGC GGGCGTTCGC GGGGCGGCGG GTGGAGCTGC GGGTGCAGTC GGGGCTGCGG
TCGACCGTGC TGACGGCCGA GGAGGACACG AGCGGGGTGC GGTTGACGTA CCTCGTGGTG
CCGCTGCGGA CGCCCTGA
 
Protein sequence
MDLTATTSEL ASAVADVARL LPGRVLDPVL AGVVLRAGPG GVELSGSDRE RSLRLSRAAT 
THSEGAALVP AKPLAETLRA LESPQVRLVV EGSRLAVRTG AARFALPLLE LGDHPGVPEL
PPVAGSAPAG AFASALAAVA TAASKDDALP VFTGVRVHAA GDRLELITSD RYRLGFASVP
WAGGALDALA PAVQLAEVAK QAARDERVEL RADADRLALA WGGGSASTAL LAAPFPDERA
RKLLAAEGEC TVVLEADELA GAVRRAAPYS GAHGAVQLAA EDGELRVRGS DPQAGESSES
VKASVSGGLL TRSFQVRYLS DALRAFAGRR VELRVQSGLR STVLTAEEDT SGVRLTYLVV
PLRTP