| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0184 |
|---|
| Symbol | |
|---|
| ID | 8324334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 196208 |
|---|
| End bp | 196987 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644940724 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003098001 |
|---|
| Protein GI | 256374341 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTCA ACGGCGCGCC GGTGACCCTG GAAGAGGTCA AAGCCCTGGC GCTCACAAAC
TACGGCCACT TCACGTCGAT GTTGGCAGAG GATGGCAAGG TGCGCGGTTT GTCGCTGCAC
TTGCAGCGCT TGGCGCGCGA TTGCCGTCTC CTGTTCGACG TGGAATTGGA CACCGACATG
GTGCGCCACT GCGTTCGGTC CGCGCTGCCG GATTCCGGGG ACCGCACCGT GGTCCGCGTG
ACCAGCTATG ACCCAGGTAT CGACCTGGGC ACCATCGGTT CCGACGCCAC GCCGCACATC
CTCGTCACCA AGCGCTCGGC GTCCGACAAG GTCCCATCGC CGATGAGATT GCAGGCAGCG
TCCTACCAGC GCGAACTTCC CACGGTGAAG CACATCGGCC TGTTCGGTGC CCTCCAGCGC
CGCCGCACCG CGCAGCGCGA GGGCTTTGAC GACGTGCTCT TCCTGAACCC CGACGGCTAC
ATCTCCGAGG TGGCCACGTC GAACATCGGG TTCGTGCGAG ACGGTCAGAT CGTGTGGCCG
CGCGCCGCTT ACCTGGCGGG GATCACGATG ACCCTGCTGC ACCAGGAGCT TGACGAACCG
GTGTCCACTG AACCGCTTTC CCTGGCTGAT CTGGGCCAGA TGGAAGCGGC ATTCGCCACC
AACGCCTCGA CCGGTGTCCG GGAGATCCTG TCGGTTGACG ACGTTGCTTG GGAAAGCGGT
CACCCGATGT TGGGGGAGTT GCGGAAGATG TACGAAGACA TTCCGGCCGA GACAGTGTAG
|
|---|
| Protein sequence | MELNGAPVTL EEVKALALTN YGHFTSMLAE DGKVRGLSLH LQRLARDCRL LFDVELDTDM
VRHCVRSALP DSGDRTVVRV TSYDPGIDLG TIGSDATPHI LVTKRSASDK VPSPMRLQAA
SYQRELPTVK HIGLFGALQR RRTAQREGFD DVLFLNPDGY ISEVATSNIG FVRDGQIVWP
RAAYLAGITM TLLHQELDEP VSTEPLSLAD LGQMEAAFAT NASTGVREIL SVDDVAWESG
HPMLGELRKM YEDIPAETV
|
|---|
| |