| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0172 |
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| Symbol | |
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| ID | 8324322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 186876 |
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| End bp | 188189 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644940712 |
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| Product | integrase family protein |
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| Protein accession | YP_003097989 |
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| Protein GI | 256374329 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.398776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGCG AGAAAAAGGG CCGGAGTGCC AACGGCCGGT CCAGCATCTA CTACAGCGAG
ACGGACCAGA GCTGGCACGG CTGGGTCACG GTCGGCACGA AGGACAACGG CCAGTCCGAC
CGCAGGCACG TCCGGGGGAA GAACCAGGAC GAGGTCTCGG ACAAGGTGAG CAAGCTGGAG
CGGATGCGCG ACCAGGGACG GGTGACAAAA GCCGGGCAGA ACTGGACCGT GGAAACCTGG
CTGAAGCACT GGCTGGAGAA CATCGTGGCT CCGCCGGTCG TCTCCGAGAA CGCGTACAGC
GCGTACGAAG TGGCGGTGCG GGTGCACCTG GTGCCCGGTA TCGGCGCTCA TCGGCTGGTG
AAGTTGCAGC CGGAGCACCT GGAGAAGCTG TACCGGGCGA TCATGCGGAA GAGCACGAAG
TTCGGTCCAA CCACCAGCTC TTCCACCGCG CACCAGGTGC ACCGGACGAT CCGGGCCGCG
CTGAACGTCG CGGTTCGGCG CAAGCACCTG ACCGAGAACC CGGCGTTGGA GGCGCGGGCG
CCCAAGCTGG AGGAGACCGA GGTCGAGCCG TACTCGGTCG ACCAGGTCAA GGCTCTGCTG
GTGACGGCGC TCAAGCGGCG GAACAGCGCG CGGTGGGCGA TCGCGCTGGC GCTCGGACTG
CGCCAGGGTG AAGCGCTCGG ACTGCGGTGG CAGGACGTGG ACTTGGAGGT GGGGACGCTC
GTGGTCCGCC GCAACCGGCT GCGGCCGAAG TGGAGGCACG GGTGCACCGA GCCTTGCGGC
AAGAAGCACG GCGGGTACTG CCCACAGCGG GTGGCGTTGC GGGAGGAGAC CGCTGGGACG
AAGTCGGCTG CGGGCAAGCG CGGGATGGGT CTGCCCGACG AGCTGGTGAG GCTGCTCAGG
GTGCACCGGG ACGTGCAGGC GCGGGAGCGT GAGCGGGCCG CTGAGCTGTG GACGGACACG
GGGTACGTCT TCACCACCCC GACCGGTGGG CCGCTCAACC CGAGGTCGGA CTACGACGAG
TGGAAGCGGC TGCTGGACAT CGCCAAGGTC CCGGACGGAC GGCTGCACGA CGCCCGGCAC
ACCGCAGCGA CCGTGCTCCT GCTGCTGGGC GTTCCCGAGC GGACCGTCAT GGGGATCATG
GGCTGGTCCA ACACCGCGAT GGCCGCGCGC TACCAGCACG TCACCGCAGC GATCCGGCTG
GACGTGGCTC AGCGGGTCGG AGGATTGCTC TGGGAGCCCG CTGAGAAGCC CACTGAGCCC
CGCGATGAGG GCGAGGAGGG TGATGCCACC GGAGCGCTTA TCCCGACCGC CTGA
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| Protein sequence | MPREKKGRSA NGRSSIYYSE TDQSWHGWVT VGTKDNGQSD RRHVRGKNQD EVSDKVSKLE
RMRDQGRVTK AGQNWTVETW LKHWLENIVA PPVVSENAYS AYEVAVRVHL VPGIGAHRLV
KLQPEHLEKL YRAIMRKSTK FGPTTSSSTA HQVHRTIRAA LNVAVRRKHL TENPALEARA
PKLEETEVEP YSVDQVKALL VTALKRRNSA RWAIALALGL RQGEALGLRW QDVDLEVGTL
VVRRNRLRPK WRHGCTEPCG KKHGGYCPQR VALREETAGT KSAAGKRGMG LPDELVRLLR
VHRDVQARER ERAAELWTDT GYVFTTPTGG PLNPRSDYDE WKRLLDIAKV PDGRLHDARH
TAATVLLLLG VPERTVMGIM GWSNTAMAAR YQHVTAAIRL DVAQRVGGLL WEPAEKPTEP
RDEGEEGDAT GALIPTA
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