Gene Amir_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0139 
Symbol 
ID8324285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp149847 
End bp150821 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content77% 
IMG OID644940675 
ProductNAD(P)H quinone oxidoreductase, PIG3 family 
Protein accessionYP_003097956 
Protein GI256374296 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.85612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGCGA TCACCCTGAG TGAGTTCGGT GGGCCCGAGG TGCTCCAGTG GTCGGAGGTG 
CGGGACCCCG CACCCGGCCC CGGCGAGGTG CTGCTGGACG TGGCGGCCAC CGCCGTGAAC 
CGGGCCGACC TGCTCCAGCG CAAGGGGCAC TACCCGCCGC CGCGCGGCGC GTCCGAGGTG 
CTGGGGCTGG AGTGCTCGGG CGTGGTGGCC GCGCTGGGGC CGGGCGTCGA GGGCTGGTCG 
GTGGGCGACG AGGTGTGCGC GCTGCTGGCG GGCGGCGGGT ACGCGGAGCG GGTCGTCGTG 
CCCGCCGCGC AGCTGCTGCC GGTGCCCGTG GGCGTCGACC TGGTGACGGC GGCGGCGCTG 
CCCGAGGTGG CGTGCACGGT GTGGTCGAAC GTGGTGGTGC TGGCCGGGCT GCGGGCCGGG 
GAGACGCTGC TGGTGCACGG CGGCGCGGGC GGCATCGGCA CGCACGCGAT CCAGGTCGGG 
AAGGCGCTGG GGGCGCGGGT CGCGGTGACC GCCGGGTCGG CGGAGCGGCT GGCGCGGTGC 
GCGGAGCTGG GCGCGGACGT GCTGGTGGAC TACCGGGAGC AGGACTTCGT CGAGGTGGTC 
GGCGCGGCGG ACGTGGTGCT GGACAACATG GGCGCGTCGT ACCTGGGGCG GAACGTGGAC 
GTGCTCGCGC CGGACGGCAG GCTCGTGGTG ATCGGGATGC AGGGCGGGGT CAAGGGCGAG 
CTGGACCTGG GGAAGATGCT GGGCAAGCGG GCCTCGCTGA TCGCGACGGG GCTGCGGCAC 
CGGCCGGTGG AGGGGCGGAC CGGCAAGGGC GCGGTCGTGG CGGCGGTGCG CGAGGGGCTG 
TGGCCGCTGG TCGCGGACGG GCGGGTGCGG CCGGTGGTGC ACGAGGTGCT GCCGCTGGAG 
CGCGCGGCCG ACGCGCACCG GGCGCTGGAG GGCGGCGGGG CGGTGTTCGG GAAGCTGGTG 
CTGGCCACGG GCTGA
 
Protein sequence
MRAITLSEFG GPEVLQWSEV RDPAPGPGEV LLDVAATAVN RADLLQRKGH YPPPRGASEV 
LGLECSGVVA ALGPGVEGWS VGDEVCALLA GGGYAERVVV PAAQLLPVPV GVDLVTAAAL 
PEVACTVWSN VVVLAGLRAG ETLLVHGGAG GIGTHAIQVG KALGARVAVT AGSAERLARC 
AELGADVLVD YREQDFVEVV GAADVVLDNM GASYLGRNVD VLAPDGRLVV IGMQGGVKGE 
LDLGKMLGKR ASLIATGLRH RPVEGRTGKG AVVAAVREGL WPLVADGRVR PVVHEVLPLE 
RAADAHRALE GGGAVFGKLV LATG