Gene Amir_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0109 
Symbol 
ID8324255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp114247 
End bp114795 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content68% 
IMG OID644940646 
ProductPeptidylprolyl isomerase 
Protein accessionYP_003097927 
Protein GI256374267 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAA GCAACAACGT GATCACCGGG CGCGACGTGT TCGCCACCCT GCACACCTCG 
GCGGGGGACG TCCGGATCAA GCTGTTCCCC CAGCACGCCC CGCAGACCGT GGCGAACTTC
GTGGAGCTGG CCGAGGGCAG GCGCGAGTAC ACGGACCCCA GGACCGGCGA GCGGACAACA
GCGCCGCTGT ACGACGGCAC GGTGTTCCAC CGGGTCATCT CCGGCTTCAT GATCCAGGGC
GGCGACCCGC TGGGCACCGG GACGGGTGGT CCCGGCTACA CGTTCGGGGA CGAGTTCCAC
CCGGACCTGT CGTTCACCAA GCCCTACCTG CTGGCCATGG CCAACGCCGG GCCGGGCACG
AACGGGTCGC AGTTCTTCGT GACGGTCAAC GCGACCTCGT GGCTGAACTT CAAGCACACG
ATCTTCGGCG AGGTCGCGGA CAGCGCGTCG CGCGGCGTCG TGGACCGGAT CTCGCTCACC
GAGACCGGGC CGCAGGACCG GCCGGTCGAC GACGTGGTGA TCGAGAAGGT CACGATCGAG
CGGGACTGA
 
Protein sequence
MTESNNVITG RDVFATLHTS AGDVRIKLFP QHAPQTVANF VELAEGRREY TDPRTGERTT 
APLYDGTVFH RVISGFMIQG GDPLGTGTGG PGYTFGDEFH PDLSFTKPYL LAMANAGPGT
NGSQFFVTVN ATSWLNFKHT IFGEVADSAS RGVVDRISLT ETGPQDRPVD DVVIEKVTIE
RD