Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0099 |
Symbol | |
ID | 8324245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 108789 |
End bp | 109388 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644940638 |
Product | Appr-1-p processing domain protein |
Protein accession | YP_003097919 |
Protein GI | 256374259 |
COG category | [R] General function prediction only |
COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.310207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCCGCCG ATACGGAGGG TGAGATCAAC GCTCCGGTTG TAGTTCCCCG TCTGGTGCTG TGCGCCGTAG ATGAACCGCT CACGAGGGCC TGGGCCGGTG TGGCCGACGG CCGAACAGGG GTGGTGGTGC ACCGCGGTTC GGTGCTCGAC ATCGTCGCCG AGGCCGTGGT CAGCTTCGGG AACTCGTCCG GCTGGTTGCG GACCGGCGTG GACGAGTTGT ACGCGCGGGC CTTCCCCCAC GTGGAGGACC AGGTGCGGCG GGCGGTGCTG GCGCTGCACG GGGGCGAGCT CCCGGTCGGG GAGGCGCTGG CCGTGCCGAC CTGCGAGCCC CAGCCCGAGT GGCTCGTCAG CGCGCCGACC AGGCGCGTGC TGGGCGAGCG CTTGCCGGAC GACAGCGTGC ACCCGTACCT CGCGGCGCGC GCGGTCCTCC GGCTGTGGCA GACCGGGCGG CTCGACGACG GCAGGCTCCT GCGCGACGTC GTGCGCACGA TCGCCATGCC GGGACTGGGA ACCGGAGTCG ACGGAGTGTC GCCGTGGACC TGCGCACGTC AGGTCGCGGC TGCCTGGGAC GAGGTGTTCA GCCCGATCCC CAGGCGCTAG
|
Protein sequence | MAADTEGEIN APVVVPRLVL CAVDEPLTRA WAGVADGRTG VVVHRGSVLD IVAEAVVSFG NSSGWLRTGV DELYARAFPH VEDQVRRAVL ALHGGELPVG EALAVPTCEP QPEWLVSAPT RRVLGERLPD DSVHPYLAAR AVLRLWQTGR LDDGRLLRDV VRTIAMPGLG TGVDGVSPWT CARQVAAAWD EVFSPIPRR
|
| |