Gene Amir_0099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0099 
Symbol 
ID8324245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp108789 
End bp109388 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content73% 
IMG OID644940638 
ProductAppr-1-p processing domain protein 
Protein accessionYP_003097919 
Protein GI256374259 
COG category[R] General function prediction only 
COG ID[COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.310207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGCCG ATACGGAGGG TGAGATCAAC GCTCCGGTTG TAGTTCCCCG TCTGGTGCTG 
TGCGCCGTAG ATGAACCGCT CACGAGGGCC TGGGCCGGTG TGGCCGACGG CCGAACAGGG
GTGGTGGTGC ACCGCGGTTC GGTGCTCGAC ATCGTCGCCG AGGCCGTGGT CAGCTTCGGG
AACTCGTCCG GCTGGTTGCG GACCGGCGTG GACGAGTTGT ACGCGCGGGC CTTCCCCCAC
GTGGAGGACC AGGTGCGGCG GGCGGTGCTG GCGCTGCACG GGGGCGAGCT CCCGGTCGGG
GAGGCGCTGG CCGTGCCGAC CTGCGAGCCC CAGCCCGAGT GGCTCGTCAG CGCGCCGACC
AGGCGCGTGC TGGGCGAGCG CTTGCCGGAC GACAGCGTGC ACCCGTACCT CGCGGCGCGC
GCGGTCCTCC GGCTGTGGCA GACCGGGCGG CTCGACGACG GCAGGCTCCT GCGCGACGTC
GTGCGCACGA TCGCCATGCC GGGACTGGGA ACCGGAGTCG ACGGAGTGTC GCCGTGGACC
TGCGCACGTC AGGTCGCGGC TGCCTGGGAC GAGGTGTTCA GCCCGATCCC CAGGCGCTAG
 
Protein sequence
MAADTEGEIN APVVVPRLVL CAVDEPLTRA WAGVADGRTG VVVHRGSVLD IVAEAVVSFG 
NSSGWLRTGV DELYARAFPH VEDQVRRAVL ALHGGELPVG EALAVPTCEP QPEWLVSAPT
RRVLGERLPD DSVHPYLAAR AVLRLWQTGR LDDGRLLRDV VRTIAMPGLG TGVDGVSPWT
CARQVAAAWD EVFSPIPRR