Gene Amir_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0097 
Symbol 
ID8324243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp107555 
End bp108184 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content73% 
IMG OID644940636 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003097917 
Protein GI256374257 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.142871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCATCC GGGTACTGCT GGTCGACGAC CACGAGGTGG TCCGCAGGGG GCTCCGCGAA 
CTGCTGGAGG ACGAGGCCGA CCTGAAGGTC GTCGCCGAGG CCGGCGGCGT TCGGGAGGCG
GTCGTGCGGG CGCAGGCGAG CAAACCAGAC GTAGCCGTAG TCGACATGAG GCTGCCCGAC
GGCACCGGTG TCGAGCTGTG CGGGAAGCTC CAGGACCTGC CCGGCGGGCC GAGGTGCCTG
GTGCTGACGG CGTTCGAGGA CGACGAGGCG CTCGTCGGGG CGATCACGGC GGGGGCGTCC
GGCTACCTGC TCAAGCAGGT GCGGGGCCAG GACCTCGTGC ACGCGGTGCG GGAGGTGGCG
GCCGGGCGGT CGCTGCTGGA CCCGGTGACG ACCTCGCGCG TGCTGGAGCG GATGCGCAAG
CCGCAGGAGC CGGACGAGCT GGCCACGCTG ACCGAGCAGG AGCGGCGGGT GCTGTCGCTC
ATCGGCGAGG GCCTGTCGAA CCGGCAGATC GCCGAGCGGC TGTTCGTGGC GGAGAAGACG
GTGAAGAACC ACGTGACGGC GGTGCTGTCG AAGCTCGGCA TGGAGCGCCG GACGCAGGCA
GCCGCGTGGG TGGCCCGCCG GGGCCGGTGA
 
Protein sequence
MTIRVLLVDD HEVVRRGLRE LLEDEADLKV VAEAGGVREA VVRAQASKPD VAVVDMRLPD 
GTGVELCGKL QDLPGGPRCL VLTAFEDDEA LVGAITAGAS GYLLKQVRGQ DLVHAVREVA
AGRSLLDPVT TSRVLERMRK PQEPDELATL TEQERRVLSL IGEGLSNRQI AERLFVAEKT
VKNHVTAVLS KLGMERRTQA AAWVARRGR