| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0095 |
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| Symbol | |
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| ID | 8324241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 103158 |
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| End bp | 106223 |
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| Gene Length | 3066 bp |
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| Protein Length | 1021 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644940634 |
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| Product | ABC transporter, CydDC cysteine exporter (CydDC- E) family, permease/ATP-binding protein CydD |
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| Protein accession | YP_003097915 |
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| Protein GI | 256374255 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit
[TIGR02868] thiol reductant ABC exporter, CydC subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCTTCC CCGGTGACCT TCCCGCCAGG AAAAAGCCGG GGCGGGGCCC GCTCGGCGCG
CTGCCGAAGC TGTCCGGTTC AGCGCGCCGG GCCCTGGTCC TGTGCGCCTT CCTCGCCGCC
TGCACGGCCG TCGCGCTCGT GGCGCAGGCG GTCACCCTCG GCACCGCGCT CGCCGACCTC
GTCGCGGGCG GCTCGCCGCT GCTGTGGCCG ATCGCCGCGA CCGTGCTCGC CCGCGCCCTG
CTCGCCTGGG CCACCGAGTC CGCCGCCGCC CGCGCCGCCG CCGGGGCCAA GGAGGAGCTG
CGCGCCGCCC TGCTCGACCG CTCGCTCGCC AACGGCCCGG AGTGGATCAC CGGTCGCGGC
CCGGCCGAGC TGACCGCGCT GGCCACCAAG GGGCTCGACG CGCTCGACGC CTACTTCACC
CGATACCTGC CCGCCCTGGT GACCACGGCC GTCGTGCCGC CCGCCGTGGG CCTGTGGATC
CTGATCAGCG ACCCCACCTC CGCGGTGCTG ATCGCCATCA CCATCCCGCT GATCCCGATG
TTCGCCATCC TGATCGGCAA GTTCACCGAG CAGAAGGTCG CCGCGGTCGC GACCACCACC
GAGAAGCTCT CCGCCCGGCT GCACGAGCTG GTCCGCGCCC TCCCGGTGCT CACCGCGTTC
GGCCGCGCCC AGGCCCAGGC CGAGGCGGTC CGCCGCACCG GCGACGCCCA CCGCAGGGCC
ACCATGGGCA CGCTGCGCGT GGCGTTCCTG TCCGCGCTGG TGCTGGAGAT CGCCGCGTCG
CTGTCGGTCG CGCTCATCGC GGTCGGCATC GGCGTGCGCC TGGTCTACGG GGACATGAGC
CTGGCGACCG GCCTGATCGT GCTGATCCTG GCCCCCGACT GCTACCTGCC GCTGCGCAAC
GCGGGCGCCG CCCACCACGC CAGCGAGGAT GGCCTGGAGG CGGTCCGCCG GGTCGCCGAG
GTCGTGGACT CCCCGCGGGC GGAGGTCACC GTCCCCGAGG CAGGCGAGAC CGGCGTGGAG
GTGCGCGACC TGCGCGTCGA GCGGCGCGGC GGGTTCGCCC CCGACGGGCT CAGCTTCACC
GTCCGGCCGG GGCAGGTGCA CCACCTGGAC GCCCCCAGCG GGCGCGGCAA GTCCACCACC
ATCGCCGCCC TCCTCGGCTT CCTCGCCCCC ACCTCCGGCG AGGTCCGGGT GCGCGGCAGC
GTCGCCTGGG TGCCGCAGCG GCCCGCGTTC GCCGCCCGCA CCGTCGCCGA GGAGCTGGAG
CTGACCACCG GGCGCGTCGA CCACGAGGTG CTGCGGCGGG TCGCCGCCGA GCACCTGGTC
GACCGGCCGG TCGCCGAGCT GTCCACCGGC GAGCGGCAGC GCGTCGCCGT GGCGCGGGCG
CTGAGCACCG GCGCGGACGT GCTGCTGCTC GACGAGCCGA CCGCCCACCT CGACCCGGCC
ACCGCCGCCA AGGTCATGGC CGCGATCACC GCCGCCGCCG AGGGCGGGGC CGCCGTCGTG
CTGGCCACCC ACCGGCTCGC CGAGGCCGCC GACACCGACG ACGACACCAC CGCCGTGCGC
GCCGCCGACC GCGAGCCCAC CACCCCGCGC ACCCCGCGCC CCACCCGCCT GCTGCTCGGC
GGCGCCGCGA TCGGCACGGC CGCGCTGCTC AGCGGCGTCG CCCTCACCGC CCTGTCGGCC
TACCTGATCG CCAAGGCCTC CACCCAGCCG CCGATCCTCA CCCTGTCCGT GATCACCGTG
GGCGTGCGGG CCTGCGCGCT GGCCAAGGGC GTGCTGCGCT ACCTGGAGCG GCTCGTCACG
CACGACGCCG CGTTCCGGTT CGCCGACGCG CTGCGCATCG ACATGTGGCG CAACCTGCGC
CCCGGCCGGG CCGAGCTGAC CCGGCTGGTG GACGACACCG ACACGGTCCG CGACCTGGTG
CCCAGGGTGC TCCAGCCGCC GCTGGCCGCC GCGGGGGTCG GCCTGGCCGC CGTGGTCCTG
CTCACCGCCA TCCAGCCGGT CGCCGGTCTC GCGCTGGCGG TGCTCCTGCT GGTCGGCGGG
CTCGCCGCGC CGCTGCTGGC CGCCGCGCTC GACCGCCGCG CCACCACCGC CCTGGCCAGG
GGCCGCCGCC GGGTCTCCGA GGACGTGCTG ACCCTGCTCA CCGCCGCCCC CGACCTGATC
GCGTTCCGCG CCGAGGGCCG CTACCGGGCC GGGCTCGCCG CCGTCGACGC CGAGCTGGCG
CGGCAGACCC GCCGCCAGGC GTTCGGCGCG GGCGCGGCCA CCGGCCTGAT CACCCTCGCC
ACCGGCCTGG CCGCCGTCGT GTGCACCGCG CTGGCAGGCG ACGTCAACCC GCTGCTCGTC
CCCGTGCTGG GCCTGGTGCC GCTGGCGCTG GTCGAGACGC TGAGCACGCT GCCCGCCGCC
GCCCAGCACC GCGCCGCGCT GCGCGAGGCC TACGGCCGCG TCACCGAGCG GCACCCCGAG
GTGAGGCCGG GGACCGGACC CGCCAAGCTG GAGAACGTGG ACGTCCGCTG GCCCGGTGCG
GCCGAACCCG TGCTCCGGGA CTTCACCCTG ACCCCCGGCG TCGGCGAGCG GATCGCCGTC
GTCGGCCCGT CCGGCGCGGG CAAGTCCACG CTGTTCGCGC TGCTCCTGGG CTTCCTGGAG
CCCGAGCGCG GCCGGGTCAG CCGCCCCGAG CGCGTCGCCT GGTGCCCGCA GGAGCCGATG
CTGGTGTCCA CCACGCTCAG GGAGAACCTC AAGCTCGGCG ACGCGCACGC GGACGACGAC
CGGCTCCGCG AGGCCCTGGT CACCGCCGGG CTGCCGGAGT GGGTCGACCG GCTCGACACG
ATGATCGGCC CCACGCTGCT CTCCGGCGGC GAGGCCCAGC GCGTCGCGCT GGCCAGGGCG
CTGCTGCACG ACGCCGACCT GGTGCTGCTC GACGAGCCGA CCGCGCACCT GGACCGCCCC
ACGGCCGAGG CCCTGCTCGA CCGGCTCGAC GTGGCGCTGA AGGGGAAGAC CGTGGTCCAC
ATCACGCACC GGCCCGAGGA GACCAGGCAC GCCGACCTGG TCCTGTCGAT GCGGCCCGCC
CGGTGA
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| Protein sequence | MSFPGDLPAR KKPGRGPLGA LPKLSGSARR ALVLCAFLAA CTAVALVAQA VTLGTALADL
VAGGSPLLWP IAATVLARAL LAWATESAAA RAAAGAKEEL RAALLDRSLA NGPEWITGRG
PAELTALATK GLDALDAYFT RYLPALVTTA VVPPAVGLWI LISDPTSAVL IAITIPLIPM
FAILIGKFTE QKVAAVATTT EKLSARLHEL VRALPVLTAF GRAQAQAEAV RRTGDAHRRA
TMGTLRVAFL SALVLEIAAS LSVALIAVGI GVRLVYGDMS LATGLIVLIL APDCYLPLRN
AGAAHHASED GLEAVRRVAE VVDSPRAEVT VPEAGETGVE VRDLRVERRG GFAPDGLSFT
VRPGQVHHLD APSGRGKSTT IAALLGFLAP TSGEVRVRGS VAWVPQRPAF AARTVAEELE
LTTGRVDHEV LRRVAAEHLV DRPVAELSTG ERQRVAVARA LSTGADVLLL DEPTAHLDPA
TAAKVMAAIT AAAEGGAAVV LATHRLAEAA DTDDDTTAVR AADREPTTPR TPRPTRLLLG
GAAIGTAALL SGVALTALSA YLIAKASTQP PILTLSVITV GVRACALAKG VLRYLERLVT
HDAAFRFADA LRIDMWRNLR PGRAELTRLV DDTDTVRDLV PRVLQPPLAA AGVGLAAVVL
LTAIQPVAGL ALAVLLLVGG LAAPLLAAAL DRRATTALAR GRRRVSEDVL TLLTAAPDLI
AFRAEGRYRA GLAAVDAELA RQTRRQAFGA GAATGLITLA TGLAAVVCTA LAGDVNPLLV
PVLGLVPLAL VETLSTLPAA AQHRAALREA YGRVTERHPE VRPGTGPAKL ENVDVRWPGA
AEPVLRDFTL TPGVGERIAV VGPSGAGKST LFALLLGFLE PERGRVSRPE RVAWCPQEPM
LVSTTLRENL KLGDAHADDD RLREALVTAG LPEWVDRLDT MIGPTLLSGG EAQRVALARA
LLHDADLVLL DEPTAHLDRP TAEALLDRLD VALKGKTVVH ITHRPEETRH ADLVLSMRPA
R
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