Gene Amir_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0093 
Symbol 
ID8324239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp100786 
End bp101790 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content69% 
IMG OID644940632 
Productcytochrome d ubiquinol oxidase, subunit II 
Protein accessionYP_003097913 
Protein GI256374253 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID[TIGR00203] cytochrome d oxidase, subunit II (cydB) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0317391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGACGT TCTGGTTCTG CGTGATCGCC CTGTTCTGGC TGGGCTTCCT CTTCCTGGAG 
GGTTTCGACT TCGGCGTCGG GATGCTGCTG CCGGTTCTGG GCAAGGACAA CACCGAGCGC
CGGGTCATGA TCAACACGAT CGGGCCGGTC TGGGACGGCA ACGAGGTCTG GCTGATCGTC
GCGGGCGCGG CCACGTTCGC CGCCTTCCCG CTCTGGTACG CGTCGCTGTT CAGCACCGCG
TTCCTCGCGC TGCTGCTGTT CCTGGTGGCG CTCATCGGGC GCGGCGTGGC CTTCGAGTAC
CGGGGCAAGG TCGACAGCGA GCGCTGGCGC AAGAACTGGG ACCGGGTGAT CATCTCCACG
TCCTGGGTCG CCTCGTTCGG CATCGGCTTC GTGCTCACCA CGAACGTCCA CGGCCTCCCG
ATCGACGAGA TCGGCGACCG GGTCGGCGGG CCGTTCAGCT ACCTCACCTG GCAGGGGATC
GTCGGCGGCC TGGCCGTCTC CGGGTTCTCG CTGGTCCACG GTGCGTTGTT CACCGCGCTG
AAGACCGAGG GCGAGATCCG GGAGCGGGCC CGCGCGCTGG TGCTCAAGAT GGCCCCGGTC
GCGCTGCTGC CGCTGGTGGT GACCCTGCTG CTGGTGCAGT TCGAGTTCGG CGGCCCCGCC
ACCTGGGGCG CCACGGTCGT GGTGCTGCTC GCGGCGGTCG GCTCGCTGGC GCGGCTGTGG
GCGGGGCGCG AGGGGCAGGC GTTCGCGCTG ATGGGCGTCG CGGTCGTGGC GACGGTGATC
GCGCTGTTCG GGGCCATGTA CCCGAACGTG CTGCCGTCCA CGGTCGACCC GGCGTTCTCG
CTGACGATCG AGAACGCGTC CTCCAGCTCG TACACGCTGA CCGTCATGAC CTGGGTGTCC
GCCTTCGGCG CGCCCGCCGT GCTGGTCTAC CAGGGCTGGA CCTACTGGGT GTTCCGCAAG
CGCATCGGCG TCAAGAACAT CCCGCCCGTG CACGTGCCGT CGTAA
 
Protein sequence
METFWFCVIA LFWLGFLFLE GFDFGVGMLL PVLGKDNTER RVMINTIGPV WDGNEVWLIV 
AGAATFAAFP LWYASLFSTA FLALLLFLVA LIGRGVAFEY RGKVDSERWR KNWDRVIIST
SWVASFGIGF VLTTNVHGLP IDEIGDRVGG PFSYLTWQGI VGGLAVSGFS LVHGALFTAL
KTEGEIRERA RALVLKMAPV ALLPLVVTLL LVQFEFGGPA TWGATVVVLL AAVGSLARLW
AGREGQAFAL MGVAVVATVI ALFGAMYPNV LPSTVDPAFS LTIENASSSS YTLTVMTWVS
AFGAPAVLVY QGWTYWVFRK RIGVKNIPPV HVPS