| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0088 |
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| Symbol | |
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| ID | 8324234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 95197 |
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| End bp | 96399 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644940627 |
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| Product | homogentisate 12-dioxygenase |
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| Protein accession | YP_003097908 |
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| Protein GI | 256374248 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTACT ACCGCCAGGT CGGGGACATC CCCCGAAAGC GCCACACCCA GTTCCGCTCT
CCGGACGGCT CCCTGTACGC GGAGGAGCTG ATGGGGGTGG AGGGCTTCTC GGCCGATTCG
GCCCTGCTCT ACCACCGCCA CCTGCCGACC GCGATCGTCG ACGCGGTGAC CGTCCCGGAC
ACCCGCGGAC CCCTCGTCCC GAACCTGCCG CTCAAGCCCC GCCACTTCCG GACCGAACCC
CTGGTCGGGT CGGACCCTGG CGGCCCTGGC GGCCCTGGCG GCGCGGCCGA CGCGGTGACC
GGCCGCAGGG TGCTGTTCGG CAACGCCGAC GTGGTGATCT GCTTCGCCGC CGCCACCGAG
CCCAGCCCGC TCTACCGCAA CGCCTTCGGC GACGAGCTGC TGTACGTGCA GTCCGGCGAG
GGCGTGGTCG AGACGATCTA CGGCGCGCTG GTGGTCGAGT CCGGGGACTA CGTGGTGCTC
CCGACCTCCT GCACCTACCG GCTGGCGCCC CGGACGCCGA TGCGCCTGCT CGTGCTGGAG
GCCACCGGGC ACATCGGGCC CCCGAAGCGG TACCTGTCGG CGCGCGGGCA GTTCCTGGAG
CACTCGCCGT ACTGCGAGCG GGACCTGCGC GGGCCCGCCG AGCCGCTGCT GGTGGACGGC
GAGGACGTGG ACGTGCTGGT GCGGCACCGC GCCGGGCTGA CCAGGATGAC CTACGCGGCG
CACCCGTTCG ACGTGGTGGG CTGGGACGGC TGCCTGTACC CGTGGGTGTT CAACATCGGG
GACTTCGAGC CGATCACCGG GCGGGTGCAC CAGCCGCCGC CGGTGCACCA GACGTTCGAG
GGTCCCAACT TCGTGGTGTG CTCGTTCGTG CCGCGCAAGG TCGACTACCA CCCGCTGGCC
GTGCCGGTGC CGTACAACCA CGCGAACGTC GACTCGGACG AGCTGATGTT CTACGTGGGC
GGGGACTACG AGGCGCGCAA GGGCTCCGGC ATCGGGCTCG GGTCGCTGTC GCTGCACCCG
GCGGGCTGCG CGCACGGGCC GCAGCCGGGG GCGGTGGAGG CGTCGCTGGG CGCGGAGTCG
TTCGACGAGA CCGCCGTCAT GGTGGACACG TTCCGACCGC TGGAGCTGGG CGAGGCGGCG
CTGGCGGGCG AGGACGCCCG GTACGCGTGG TCGTGGTCGC GCCGGGGACC GGACCTGGAC
TAG
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| Protein sequence | MPYYRQVGDI PRKRHTQFRS PDGSLYAEEL MGVEGFSADS ALLYHRHLPT AIVDAVTVPD
TRGPLVPNLP LKPRHFRTEP LVGSDPGGPG GPGGAADAVT GRRVLFGNAD VVICFAAATE
PSPLYRNAFG DELLYVQSGE GVVETIYGAL VVESGDYVVL PTSCTYRLAP RTPMRLLVLE
ATGHIGPPKR YLSARGQFLE HSPYCERDLR GPAEPLLVDG EDVDVLVRHR AGLTRMTYAA
HPFDVVGWDG CLYPWVFNIG DFEPITGRVH QPPPVHQTFE GPNFVVCSFV PRKVDYHPLA
VPVPYNHANV DSDELMFYVG GDYEARKGSG IGLGSLSLHP AGCAHGPQPG AVEASLGAES
FDETAVMVDT FRPLELGEAA LAGEDARYAW SWSRRGPDLD
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