Gene Amir_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0076 
Symbol 
ID8324222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp84163 
End bp85212 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content74% 
IMG OID644940615 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003097896 
Protein GI256374236 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGCAC TGGGCGCGGC ACTCGTGGTG ATGCTCCTGC TCCCCGGCGC GGCCTCGGCC 
GGAGCCGGGA CCGGGGCCGG GCACGGGCAC GGGCACGGGC ACGGCAAGCA CGGCTTCGAC
CTCCAGGCCC ACCGGGGCGG CATCGGGCTC ACCGTCGAGA GCACGCTCGC CGCGTTCGCC
AAGGCCCTCG AGGTCGGCGT CACCACCCTG GAGCTGGACG TCCAGATCAC CAGGGACGGC
CGCGAGGTCG TCACGCACGA CCGCAGGACC AACCCCGCCA AGTGCGTCGA CACCGCCCCC
GCGCGCCCCG GCGACCCCGA GTTCCCCTAC GCGGGCAAGT ACGTCAAGGA CCTCGACTTC
GCCCAGGTCC GCACGCTCGA CTGCGGCTCC CGCCGCTCGG CCCAGCACCC CGACCAGGAG
CTGTCGCCCG GCGCCCGGAT GCCCACCCTC GCCGAGGTGT TCGCCCTCGC CCGCCGCTAC
CGCGCGCACG ACGTCCGGTT CAACGTCGAG ACCAAGGTCG AGGCCGCCGC GCCGCACGAG
ACCGCGCCGC GCGAGCAGTT CGTCGACGTC ACCTGGCGCG AGATCCGCCG CTCCGGCTTC
GAGCGCGACG TGACCATCCA GTCCTTCGAC TGGGGGACCC TGATGCTGTG GCGGAAGGTC
GCACCGCGAC TGCCGGTGAT CGCCCTGACC CAGCCCGAGT TCCTCGCCCC CGGCTCGCCC
TGGACCGGCG GCCTCGACCT GGCCGACTTC GGCGGCAGCC CGGCCCGCGC CGCCCGCAGC
TTCGGCGCCT CCGCGCTGTC CCCGGTGCAC GGCAACCCGC AGAACGGCAA GGTCGGCGAC
CCCGACTACG TCCCGTTCAC CACCGAGGCC CTGGTCGAGG ACGCGCACCG GAACGGCCTC
GAGGTCATCC CGTGGACCGT CAACGACCCC GCCACCATGC GCAAGCTCAT CCGCGACGGC
GTGGACGGCC TGATCACCGA CTACCCCGAC CGGCTGCGCG CCGTCCTCGA GGACCTCGGC
TACCGCCTGC CCCAGCGCTA CCACCGCTGA
 
Protein sequence
MRALGAALVV MLLLPGAASA GAGTGAGHGH GHGHGKHGFD LQAHRGGIGL TVESTLAAFA 
KALEVGVTTL ELDVQITRDG REVVTHDRRT NPAKCVDTAP ARPGDPEFPY AGKYVKDLDF
AQVRTLDCGS RRSAQHPDQE LSPGARMPTL AEVFALARRY RAHDVRFNVE TKVEAAAPHE
TAPREQFVDV TWREIRRSGF ERDVTIQSFD WGTLMLWRKV APRLPVIALT QPEFLAPGSP
WTGGLDLADF GGSPARAARS FGASALSPVH GNPQNGKVGD PDYVPFTTEA LVEDAHRNGL
EVIPWTVNDP ATMRKLIRDG VDGLITDYPD RLRAVLEDLG YRLPQRYHR