Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0071 |
Symbol | |
ID | 8324217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 79962 |
End bp | 81548 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644940610 |
Product | SSS sodium solute transporter superfamily |
Protein accession | YP_003097891 |
Protein GI | 256374231 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACACCA ACGCCGTCCT GAACATCGGC ATCTTCGGGC TCTTCGTCGC GGCGACCCTG GTCGTGGTCA TCCGGGCCAG CCGCAACACC AAGACCGCGG CGGACTACCT GGCGGCGGGC CGCGCGTTCA CCGGCCCGCA GAACGGCATC GCCATCGCGG GCGACTACCT GTCCGCCGCG TCGTTCCTGG GCATCGCGGG CGCCATCGCG GTCTACGGGT ACGACGGCTT CCTGTACTCC ATCGGGTTCC TGGTGGCCTG GCTGGTGGCG CTGCTGCTGG TCGCGGAGCT GCTGCGCAAC ACCGGCAAGT ACACGATGGG CGACGTGCTG AGCTTCCGGA TGCGCCAGCG CCCGGTCCGC GCGGCGGCGG CCACGTCGAC CATGGTCGTG TCGTTCTTCT ACCTGCTGGC GCAGATGGCG GGCGCGGGCG GCCTGGTGGC GCTGCTGCTC GGCATCACCG GCAAGGGCGG CCAGGCGATC GTGATCGCGG TGGTCGGCGC GCTGATGATC GCGTACGTGC TGATCGGCGG CATGAAGGGC ACCACCTGGG TGCAGATCAT CAAGGCCGTG CTGCTGATCG TCGGCGCGGG CGTGATGACG ATCTGGGTGC TGGCGAAGTA CGGGTTCAAC CTGTCCACGC TGCTCGGCGC GGCGGTCGAC AACGCGCCGA AGGCGGGGGA GAAGCTGCTC GGGCCGGGCC TGCAGTACGG GGCCACCGGC ACGACGAAGC TGGACTTCCT CTCGCTCGGC CTCGCGCTGG TGCTCGGCAC CGCGGGCCTG CCGCACATCC TGATGCGCTT CTACACGGTG CCCACCGCGA AGGAAGCGCG CCGGTCCGTG GTGTGGGCGA TCTGGCTGAT CGGCCTGTTC TACCTGTTCA CCCTGGTCCT GGGCTACGGC GCGGCGGCCC TGGTCGGCCC CGACAAGATC AACGCGGCAC CGGGCAAGGC GAACTCGGCG GCCCCGCTGC TGGCCGAGGC GATCGGCGGC CCGCTGCTGC TGGGCCTGAT CGCGGCGGTC GCGTTCGCGA CGATCCTCGC GGTCGTCGCC GGGCTGACCA TCACCGCGTC GGCGTCGTTC GCGCACGACA TCTACGCCAA CGTGATCAAG AAGGGCGAGG TGGAGGACAA GGACGCGGAG GTGAGGGTGG CGCGGCGGAC GGCCATCGTC ATCGGCGTCG TGTCCATCCT CGGCGGCATC GCGGCGAACG GCCAGAACGT GGCGTTCCTG GTGGCGCTGG CGTTCGCGGT CGCGGCGTCG GCGAACCTGC CGACGATCCT GTACTCGCTG TTCTGGAAGC GCTTCAACAC GGCGGGCGCC CTGTGGAGCA TCTACGGCGG CCTGTCGGTG ACCCTGGTCC TGATCGTCCT GTCGCCCGCG GTCTCCGGAA GGCCGACCTC GATGTTCCCG ACGATGGACT TCGACCTGTT CCCCCTGTCG AACCCCGGCA TCATCTCGAT CCCGCTGGCG TTCCTGCTGG GCTACCTGGG CACGGTCCTG TCGAAGGAGC GGAACCCGGC GAAGTACGCC GAGATGGAGG TCCGCGCGCT GACCGGCACG GGCGCGGAGA AGGCCACCTC GCACTGA
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Protein sequence | MNTNAVLNIG IFGLFVAATL VVVIRASRNT KTAADYLAAG RAFTGPQNGI AIAGDYLSAA SFLGIAGAIA VYGYDGFLYS IGFLVAWLVA LLLVAELLRN TGKYTMGDVL SFRMRQRPVR AAAATSTMVV SFFYLLAQMA GAGGLVALLL GITGKGGQAI VIAVVGALMI AYVLIGGMKG TTWVQIIKAV LLIVGAGVMT IWVLAKYGFN LSTLLGAAVD NAPKAGEKLL GPGLQYGATG TTKLDFLSLG LALVLGTAGL PHILMRFYTV PTAKEARRSV VWAIWLIGLF YLFTLVLGYG AAALVGPDKI NAAPGKANSA APLLAEAIGG PLLLGLIAAV AFATILAVVA GLTITASASF AHDIYANVIK KGEVEDKDAE VRVARRTAIV IGVVSILGGI AANGQNVAFL VALAFAVAAS ANLPTILYSL FWKRFNTAGA LWSIYGGLSV TLVLIVLSPA VSGRPTSMFP TMDFDLFPLS NPGIISIPLA FLLGYLGTVL SKERNPAKYA EMEVRALTGT GAEKATSH
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