Gene Amir_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0066 
Symbol 
ID8324212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp75285 
End bp76157 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content74% 
IMG OID644940605 
Productpeptidase S49 
Protein accessionYP_003097886 
Protein GI256374226 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID[TIGR00706] signal peptide peptidase SppA, 36K type 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTGA CCGACAAGAT CGCCTCGCGG CTCCCGAAGA TCGTCGGCGA CCGGGTCGAC 
CGCGGCCCGG TCGTCGCCGC GGTCCGGCTG CACGGGGTCA TCACCCCGAA CCCCGGACCG
GTCGCCGCGC GCGGCAGCCT GAACGCCCAG TCCGTCGAGT CCGCGCTGAC CCGCGCCTTC
GAGCACGAGC GCCTGGTCGC CGTGGCGCTG CTGGTGAACT CGCCCGGCGG CGCCCCGACC
CAGTCCGCGC TGATCGCCGA CCGCGTCCGC GAGCTGGCCG CGAAGCGCCG GGTGCCCGTG
CTGGCGTTCT GCGAGGACGT CGCGGCCTCC GGCGGCTACT GGCTGGCCTG CGCCGCCGAC
GAGATCCACG CGCACCCCAC CTCGCTGGTC GGCTCCATCG GCGTCGTCAG CTCCGGGTTC
GGCCTCACCG GGCTGATGGA GCGCTTCGGC GTCGAGCGCC GGGTGCACAG CGCGGGCGAG
AGCAAGGTGC GGCTCGACCC GTTCCAGCCG GAGAAGGCCG AGGACGTGGC CTGGCTGGAA
GGTCTCCAGT CCGAGCTGCA CGAGCAGTTC AAGGCGTGGG TCACCGAGCG CAGGGGGCGC
AGGCTGGCCG CCGACGCGCC CGACCTGTTC GCCGGCGAGG TCTGGACCGG GGCCAAGGCG
CTGGAGCTGG GGCTGGTCGA CGGGCTGGGC ACGCTGCGCG GCGTCATCGG CAAGCGCTAC
CCCGACGCCG AGATCGCCAT CGCCGAGCCC CGCAGGAACC TGCTCAGCAG GCTCGGCCTC
GGCAACGCGG CGTCCACACG ATCGGGTGAC TTCGTGACGC AGGCGCTGGC GAGCCTGGAG
GAGCGCGCGC GCTGGTCCCG ATTCGGCTTG TGA
 
Protein sequence
MSVTDKIASR LPKIVGDRVD RGPVVAAVRL HGVITPNPGP VAARGSLNAQ SVESALTRAF 
EHERLVAVAL LVNSPGGAPT QSALIADRVR ELAAKRRVPV LAFCEDVAAS GGYWLACAAD
EIHAHPTSLV GSIGVVSSGF GLTGLMERFG VERRVHSAGE SKVRLDPFQP EKAEDVAWLE
GLQSELHEQF KAWVTERRGR RLAADAPDLF AGEVWTGAKA LELGLVDGLG TLRGVIGKRY
PDAEIAIAEP RRNLLSRLGL GNAASTRSGD FVTQALASLE ERARWSRFGL