Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0056 |
Symbol | |
ID | 8324201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 64376 |
End bp | 65581 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644940594 |
Product | hypothetical protein |
Protein accession | YP_003097876 |
Protein GI | 256374216 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.227027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACTGGC AGGAGGAACT GCGCAAGCTG GACGAGGAGC TTGCCGCAGG GCGGATCTCG GCCGACGACT ACCGGACCCG CCGGGACCAG GTGCTGTCCT CGGCCCAACC CGCCGCCCAG CCAGCGCCGC CGCAGGAGTG GCAGGCGCAG CAGCCCTCGG GCGGGCCCTC GAACGGCCCC ACCGGCACCA GCACCGGGGC CACCCAGTAC ATCCAGCCGG TGAACCCGGA CGCCACCCAG GTCGTGCCCG GCGGCGGCAA CCGCCCCGGC CACAACCCGG ACGCCACGCA GGTGGTGCCC GGCGGCGGCA ACCGGCCCGG CGACTCGGAC CGCACCCAGG TCGTGCCGAA CGGCGGGATG GCACCGCAGT ACGGCCAGCC CTCGCCGGCG GGCGGCTTCC CGCAGCCCGG CGCGTTCGGC GGCCCGCAGC AGGGCGGCGG GATGCCGCCG TGGCAGGGCG GTGGCGGGGA CACGTCCGCG CCGTGGGCGT CGTCGTCGAG CGACAACTGG CTGCGGCAGG GCCCCGAGGT GTTCGACGAG GGCTCGTCCG GCGGCGGCAA GAAGGTCTTC GCGATCATCG GCGTCGTGCT GGTGGTAGCG CTGATCGGCG GCGCGGTGTG GTTCTTCGGC TTCAAGGGCT CCGGCGACGA CTCGGCCAAG GGCGGCGACA CGCCCGCCCC GCAGTCGTCC ACCTCGGCGC CGACCACGAC CACCACCAAG GCGCCGATCG ACCTGCTGCC CGACCCGCCC GGCACGCCGA GCACCAACAA CGGCACGGTC GAGCTGGCGC GCGCGGTCGA GGAGAAGCTG CTGAGCGCCG ACGAGGCCGC CGCCGTCGAG GAGGCCGCCG TCAAGGAGGT CGCGTTCGTG GGCAGCACGC AGGACGCGTT CACCTACGAC GCCATGGTGT TCGAGGTCGG CGACGAGGCC AAGGCCGAGG CGCTGGTCGA GGGCCTGGTC GCGGCGCAGG GCAAGACCGG CATGGTGGAC GGGGCCAAGG GCCAGCTGCC CGCGCAGTCG ACGGTGCAGC AGCTGATCCG CCAGGGCGAG CCCGGCATCT ACCGCGCGAT CTACGCGGCG GGTGACAAGG TCGTCCGGGT CTCCACCACG CAGACCCCGA TCGCGCCCGG CCCGAACGAC CAGGAGCTGA TCAAGAAGTT CCAGGAGTTC GGCATCGGCG TGGCGAAGCA GTTCCCGACC TCCTGA
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Protein sequence | MNWQEELRKL DEELAAGRIS ADDYRTRRDQ VLSSAQPAAQ PAPPQEWQAQ QPSGGPSNGP TGTSTGATQY IQPVNPDATQ VVPGGGNRPG HNPDATQVVP GGGNRPGDSD RTQVVPNGGM APQYGQPSPA GGFPQPGAFG GPQQGGGMPP WQGGGGDTSA PWASSSSDNW LRQGPEVFDE GSSGGGKKVF AIIGVVLVVA LIGGAVWFFG FKGSGDDSAK GGDTPAPQSS TSAPTTTTTK APIDLLPDPP GTPSTNNGTV ELARAVEEKL LSADEAAAVE EAAVKEVAFV GSTQDAFTYD AMVFEVGDEA KAEALVEGLV AAQGKTGMVD GAKGQLPAQS TVQQLIRQGE PGIYRAIYAA GDKVVRVSTT QTPIAPGPND QELIKKFQEF GIGVAKQFPT S
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