Gene Amir_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0053 
Symbol 
ID8324198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp57672 
End bp59063 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content77% 
IMG OID644940591 
Producthypothetical protein 
Protein accessionYP_003097873 
Protein GI256374213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.560507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGCCG ACCCCCAGCC CGCAGGCGGA ACCGCAGCCC TGTGGAGCAG CAGCGACCTG 
CCCGGACTGG GCGACCAACT CCTCGTGCGC GTGATCGAGC GCGAGCTCCG CGCCCGCCTC
GGCGACTGGT GCGTGCGCCC GTTCGCCCCG CACGGGTGGA CCCGGCCCCA GCGCGCCGAC
GCGGGCTTCA TCGCCGAGCC GCTCGGCGAG CGCACGCCCC ACCGGGTGCG GGAACTGGCC
GAGAACCACC ACCTGCACCT GGTCGCCCCC TCGTTCCCGC TCGGGGACGA CCTCGCCGCG
CGCTACGGCG CCGACGTGCC GGGCGCGGCG TTCTTCACCG CGGGCCTCGG GCTGCGCCCG
GACGCGGCGT GCGTCGCGGT CCGCGTCGCC GAGGCCGTGC CCGCCGAGCT GGTCGCCTGG
GCCGGTCGGC AGCCCCTGCT GTCGGTGCGC GACGAGGAGT CCGCGCGGCG GCTGCGCGAG
GCGGGCGTCA AGGGCGAGGT GGCCGTGGTC GGGCACCCCG GCCTGCTGCT GGAGCGGCTG
CTCCCCGCCG ACTCGCTCAA GGCCCGCGCG AACCAGCTGC GCCAGCTCGG CCAGCTGCCC
GCCGACGGGC GCAGCTACCT GGTCGTGCAG GTGCCCGCCG AGGGCTTCGA GAAGCTCCGC
CCCACCATCG CCAAGATCGT CGAGCTGCTG GCCGTGCAGG ACGTGGTGCT GCTGCCGATC
GGGGTGCCCG TTCCCGAGGG CGACTGGGCC GCGCTGCCAC CGGACACGGT GCTGGAGGAC
CGGGCCGCCG TGCTCGCCGA CTCGGCCGCC GTGATCGCGG TGGACGAGCA CGTGGCCGCC
GCCGCCCAGG CCTACGGGCG CAACTGGGTG CTGCTGGACC CGACCGGTCG CGAGGGCGCC
GCCGCCGAGC TGTTCGGCGC GGCCGAGCGG GTCGCGCAGC GGCCCAGCCA GCTCGCCGCC
GCGTTCCGCC GGGCGCTGAA GGCGGGCCCT GGTGGGCACG AGGAGGCCGT GCGGGCGCTG
GACGAGCACC TGGACGCGGT GGCCAAGACC GCCGAGGCGG CGTTCGCGGC CAGCGGCCAG
GGCCTGCCCG ACCGGGTCGC CGCGCTGGTC GCCGAGAACC GCGCGCTGCG GGTGGCCCAC
CACCGGCTGC GCGAGCGCGT CACCGCCGAC CGGCACGCCA TGGTCGAGCT GACCCTCAAG
GGCGGCCCGG TGGAGGGCGG CCCCGAGCTG GAGGAGGAGC GGCGGTTGCA CGGCGAGCTG
GCCGAGCGGC ACCGGGAGCT GGTGGAGCGG CTGGGCGCCT CCGAGCGGGA GCTGGACGCC
ATGCGGCGCA CCAAGCTCTT CCGCTACACG CGCGCCCTGC GGTTCGTGTA CGGGAAGCTG
CGCAGCCGAT GA
 
Protein sequence
MLADPQPAGG TAALWSSSDL PGLGDQLLVR VIERELRARL GDWCVRPFAP HGWTRPQRAD 
AGFIAEPLGE RTPHRVRELA ENHHLHLVAP SFPLGDDLAA RYGADVPGAA FFTAGLGLRP
DAACVAVRVA EAVPAELVAW AGRQPLLSVR DEESARRLRE AGVKGEVAVV GHPGLLLERL
LPADSLKARA NQLRQLGQLP ADGRSYLVVQ VPAEGFEKLR PTIAKIVELL AVQDVVLLPI
GVPVPEGDWA ALPPDTVLED RAAVLADSAA VIAVDEHVAA AAQAYGRNWV LLDPTGREGA
AAELFGAAER VAQRPSQLAA AFRRALKAGP GGHEEAVRAL DEHLDAVAKT AEAAFAASGQ
GLPDRVAALV AENRALRVAH HRLRERVTAD RHAMVELTLK GGPVEGGPEL EEERRLHGEL
AERHRELVER LGASERELDA MRRTKLFRYT RALRFVYGKL RSR