Gene Amir_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0040 
Symbol 
ID8324185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp44172 
End bp45191 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content79% 
IMG OID644940578 
Productcopper resistance D domain protein 
Protein accessionYP_003097860 
Protein GI256374200 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1276] Putative copper export protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCCG ACCGGACCAG CGGCCCCGCC CGCCCCCGTG CGCGGGTGGC GGGCGGGCTG 
CTGCTGGGCG CGCTCGCCGG CGTGCTCGTC GGGCTCGCGA TCGCGGGCAC CGGCGCGGCG
GTCGGCGGGC CGGGGATCGC CGCGCTGGTG GCGCAGCCGC TCGCCAGGGT CCTGCTCGAC
CTCTCGGCGA CCGGCGTGGT CGGCCTGTCG CTGCTGCCGA GGCTGCTGGG CGCGGCCCGC
CCCTCGGCGA CCGAGCCGGT GCTGCGGCTG GCCAGGCCCG CCGCCGTGGT GCTGTCGGCG
GTGTGGGCGC TCGTCGCGCT GCTGTCGGTC GTGCTGCGCG CGCACGAGAC CAGGCCGGAC
GTGCCGCTGA CCACGGCCCG GCTGCTCGAC TACGTCCAGC GGGTGCCCGC AGGCCAGGGG
CTGCTGTTCA GCGCGGTGTG CGCGGTGGTG TGCCTGGGGG TCGGCGCGGT CGCGGTGCGC
AGGGGCGAGG CGGTGCCCGC CGAGCTGCGG GTGCTGGTCG CCCTGTTCGG GCTGCTCCCG
CTGCCCGCCA CCGGGCACGC GTCGAACCGG GACTTCCGGG ACGTGGCCGT GGTCGCGATG
GAGCTGCACG TGCTGGGCGC GGCGCTGTGG ACCGGCGGGC TGGTCGCGCT GGTCGTGCTC
GTGGCGCACC GCAGGGGGCT GCTGGCCGAG GCGCTCCCCC GGTTCTCCAG GCTGGCGACC
GCCGCGCTGC TGGTGGTGAC CGCGACCGGG ATCGGCACCG GGCTGCTGGA GCTGGCCGCC
GCGCCGGGCG GCGGGCTGCC GGGCTCGCTG GTCACCACCC CGTACGGGCT GCTGCTGGTC
GGCAAGGCGC TGTGCGCGCT GGCGCTCGCC GGGCTCGGGG CGCGCATCCG CTGGTGGCTG
CTGCCGCTCG TCCGGCGGCA CCGGCCGACC GCGCTGGTCG GCTGGGCGGC GGCGGAGCTG
GCCGTGATGG GCGCGGCGTT CGGGCTCGCG GTGGTGCTCT CGCGCGCGCC GGTCGCCTAG
 
Protein sequence
MTADRTSGPA RPRARVAGGL LLGALAGVLV GLAIAGTGAA VGGPGIAALV AQPLARVLLD 
LSATGVVGLS LLPRLLGAAR PSATEPVLRL ARPAAVVLSA VWALVALLSV VLRAHETRPD
VPLTTARLLD YVQRVPAGQG LLFSAVCAVV CLGVGAVAVR RGEAVPAELR VLVALFGLLP
LPATGHASNR DFRDVAVVAM ELHVLGAALW TGGLVALVVL VAHRRGLLAE ALPRFSRLAT
AALLVVTATG IGTGLLELAA APGGGLPGSL VTTPYGLLLV GKALCALALA GLGARIRWWL
LPLVRRHRPT ALVGWAAAEL AVMGAAFGLA VVLSRAPVA