Gene Amir_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0038 
Symbol 
ID8324183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp42689 
End bp43585 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content75% 
IMG OID644940576 
Productaminoglycoside phosphotransferase 
Protein accessionYP_003097858 
Protein GI256374198 
COG category[R] General function prediction only 
COG ID[COG3173] Predicted aminoglycoside phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGGTG GTGGCCGGTT CACCCCCGCC GTGCTCGCGG ACGTCCTGGA GCGGCTGTGC 
GCGGGCCTCG GTCTCGACCA CCGGGGCGCG CGGCTGCTGA AGTTCACCGC CAACGCGGTG
TACGAGCTGC CCGCCGAGCA GGTCGTGGTG CGGATAACGG GGTCGATGGC GCTGCGCCAC
CGGGCGCCCA AGGTGGTCGC GGTCGCCCGC TGGCTGGCCC GGCACGACGT GCCCGCCGTG
CGGCTGGTGG AGGACGTGCC CCAGCCGCTC GTCGTGGGGG AGCACGTGGC CACCCTGTGG
CGCACCGCGC CGAGCGGCGG CCCGCCCGTC GACGGCCGCG ACCTCGGCAG GCTGCTCCGG
TTGGTGCACT CGCTGCCGGA GCCGGACTTC GCGGTGCCGA AGTGGTCTCC GCTGGAGGAC
GTGCGGCGGC GGATCGCCGA CGCCGAGGAG CTGGCGGCGG ACGACCTGGA GTTCCTGGAG
GAGCGCTGCG CGGCGCTCGC CGAGCGGCTC CGCTCGCTGG AGACGGCGCT CCCGGTCGGC
CTCGTGCACG GGGACGCGCA CCTGCGCAAC CTCATCCCGA GCCCGGACGG GCCCCTGATC
TGCGACTTCG ACTCGACCGG GCTGGGGCCG AGGGAGTGGG ACCTGTCCAT GGTCCCGGTC
GGCGCGGCCC GGCTCGGCCA CCCGTGGCGG TGGCACGAGC AGCTCGCCGC CGAGTACGGC
TTCGACGTGA CCGGGTGGCC GGGGTACGCC CTGCTCAGGG ACGTGCGTGA GCTGAAGCTC
ACCACCAGCG TCCTGCCGAT CCTGCGCAGC CACCCCGAGG TCGCGCCTGA GCTGCGGCGA
CGACTTCGAT CACTGCGCGA GGGCGATTCA GGGACCCGCT GGGAGCCCTA CCGCTGA
 
Protein sequence
MAGGGRFTPA VLADVLERLC AGLGLDHRGA RLLKFTANAV YELPAEQVVV RITGSMALRH 
RAPKVVAVAR WLARHDVPAV RLVEDVPQPL VVGEHVATLW RTAPSGGPPV DGRDLGRLLR
LVHSLPEPDF AVPKWSPLED VRRRIADAEE LAADDLEFLE ERCAALAERL RSLETALPVG
LVHGDAHLRN LIPSPDGPLI CDFDSTGLGP REWDLSMVPV GAARLGHPWR WHEQLAAEYG
FDVTGWPGYA LLRDVRELKL TTSVLPILRS HPEVAPELRR RLRSLREGDS GTRWEPYR