Gene Amir_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0034 
Symbol 
ID8324179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp37872 
End bp39179 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content76% 
IMG OID644940572 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003097854 
Protein GI256374194 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCCC TCGGACCGGG CGCGCCGGAC CCCGCGATAA CCGGCCCCGC CGCGCCGAAC 
CCAGTCGTGC CGGATTCCGC CGCGACCGCC CACGACCCGC TCGCCGAACC GGTCGCCCCG
GTCGGCCGGG GCTGGACGAC CCTGCTGTTC CTGGCCAACC TCGGCCTGTG GCTCGGCGTC
TACGCCCCGA TCCAGGTGCT GCTCCCGCAG CAGGCCGAGC GGATCTCGCC CGACGCGAAG
GAGCTGGTGT TCGGACTGGT CACGGCCCTG GGCGCGGCTG TGGCGCTGAT CGCCAACCCG
CTCATCGGGC TGTCCTCGGA CCGCACCTGC TCCCGGTTCG GCCGCCGCCA CCCGTGGACC
CTCGCGGGCG CGCTGGTCGG CGCGCTCGGC CTGGCCGTGC TCTCCGCCGC CGACGCGACC
TGGTCGATGG CGCTCGGCTG GTGCCTGGTC CAGGCCGGGC TCAACGGGAT GCTCGCCAGC
CTCACCTCCG GCGTCCCCGA CCGGGTGCCG GTGGCGCAGC GGGCCAGGGT CGGCGGACTC
GTCGGCATCA GCCAGATGCT CGGCACCGTG CTGGGCGCCG TCGTGGTGAC CGTGCTGGTC
ACCGGCCAGA CCGCCGGCTA CCTGGTGTGC GCGGCGCTGG TCGTCGCGGG CGCGCTGGCG
TTCGTGCTCG CCACCCCGGA CACCCGGCTG CCGCGCGCCG CCCGCCCGCC GCTCGTCGCG
CGCGAGCTGT GGGTCTCCCC GAAGCGGCAC CCCGACTTCG CCTGGGCGTG GACCGCGCAC
TTCGCCATCA ACCTCGGCAA CGCGCTCGGC ACCCTCTACC TGCTGTTCTT CCTGGCCGAC
GAGGTGCGCC ACCCGTCGCC CGAGGACGGC CTGCTGGTGC TGATGCTGCT CTACGGCGCG
GCGCTCGTGG TCGGCGCGGT GCTCGTCGGC GCCCGCTCCG ACCGCACCGG CCGCAGGCGC
GGCGGCGTCC ACCTGTCCGC CGCGCTCATG GCGCTGGCCG CGCTGCTGCT CGCCGCCTGG
CCCACCTGGT GGTCCGCGCT GATCGCGGCC CCGCTGCTCG GGTTCGGCTT CGGCGCCTAC
TGGGCGGTCG CGCTGGCCCT GCTCACCCAG GTGCTGCCCG CCGCGACCGA CCGCGCCAAG
GACCTCGGCG TCGTCAACGT CGCGAACGCG CTGCCCCAGG TGCTCGCCCC CGCGCTGGCG
TCGGTGGTGC TGGTCGACCT CGGCGGCTAC CGGGGCCTGT TCCTGCTCTC GGCGGCGGCG
ACGCTCGTCG CCTCGCTGTG CGTCACGCGG ATCAGAGGAG TGCGATGA
 
Protein sequence
MSALGPGAPD PAITGPAAPN PVVPDSAATA HDPLAEPVAP VGRGWTTLLF LANLGLWLGV 
YAPIQVLLPQ QAERISPDAK ELVFGLVTAL GAAVALIANP LIGLSSDRTC SRFGRRHPWT
LAGALVGALG LAVLSAADAT WSMALGWCLV QAGLNGMLAS LTSGVPDRVP VAQRARVGGL
VGISQMLGTV LGAVVVTVLV TGQTAGYLVC AALVVAGALA FVLATPDTRL PRAARPPLVA
RELWVSPKRH PDFAWAWTAH FAINLGNALG TLYLLFFLAD EVRHPSPEDG LLVLMLLYGA
ALVVGAVLVG ARSDRTGRRR GGVHLSAALM ALAALLLAAW PTWWSALIAA PLLGFGFGAY
WAVALALLTQ VLPAATDRAK DLGVVNVANA LPQVLAPALA SVVLVDLGGY RGLFLLSAAA
TLVASLCVTR IRGVR