Gene Amir_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0029 
Symbol 
ID8324174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp32468 
End bp33103 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content75% 
IMG OID644940567 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003097849 
Protein GI256374189 
COG category[M] Cell wall/membrane/envelope biogenesis
[G] Carbohydrate transport and metabolism 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.825731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCTTG TGATCGCGGG AGGGCACGGG AAGATCGCGC TGCACGTCCA GCGGCTGCTG 
GCGGCCGGCG GGGACGCGGC CACCGCGCTG GTCCGCAACG AGGACCACTT CGCGGACGTG
ACCGAGGCGG GCGGGGTGCC GGTGCTGTGC GACCTGGAGG CGAGCGATGT CGCCTCGGTC
GCCGAGTACC TGACCGGCGC GGACGCGGTG CTGTTCGCCG CGGGCGCCGG GCCCGGCAGC
GGGGTGGGGC GCAAGGACAG CGTGGACCGG GGAGCCTCCG CGCTCCTGGC GGACGCCGCC
GAGCGGGCGG GCGTGCGCAG GTTCGTGCAG ATCAGCTCGG CGGGCATCGG CCGGACCACC
GGCGACGAGG TGTTCGACGC CTACCTGCTC GCCAAGGGCG CGGCCGAGGA GGACCTGAAG
GCCCGCGACC TGGACTGGAC GATCGTCCGG CCCGGCAGGC TGACCGACGA GCCCGCGACC
GGCGCGGTCC GGCTCACCGA GGGGGACGCT CAGGACGGGT CCGTGCCGCG CGCCGACGTG
GCCGCCGTGG TCGTGGCGGT GCTGGCGCAG CCGTCGTCGG TCGGGAAGAC CTACGAGCTG
ATCTCCGGCG AGACCCCGGT CCAGGACGCG ATCTAG
 
Protein sequence
MRLVIAGGHG KIALHVQRLL AAGGDAATAL VRNEDHFADV TEAGGVPVLC DLEASDVASV 
AEYLTGADAV LFAAGAGPGS GVGRKDSVDR GASALLADAA ERAGVRRFVQ ISSAGIGRTT
GDEVFDAYLL AKGAAEEDLK ARDLDWTIVR PGRLTDEPAT GAVRLTEGDA QDGSVPRADV
AAVVVAVLAQ PSSVGKTYEL ISGETPVQDA I