Gene Amir_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0027 
Symbol 
ID8324171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp29891 
End bp31153 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content71% 
IMG OID644940564 
ProductFHA domain containing protein 
Protein accessionYP_003097847 
Protein GI256374187 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.340956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCCTCG TACAGCGCTT CGAGCGCCGT CTCGAAGGCA TGGTTGGCGA CACCTTCGCC 
AGGGTGTTCG GCGGCAACGT CGTCTCGCAG GAAGTGGCCC AGGCCCTCCA GCGGGAGGCG
GACGGGAACA TCCGGGAGCT GGCGGGCGGG CGGCTGCTGG CCCCCAACCA CTACGTGGTC
CTGCTCGGCC CTGAGGACCA CGACAGGCTT GCCGGTGACG GCCAGGATGA ACTACGCATC
ACCAAGTCCC TGGGCGACTC CATCCAGGAG CACCTGGAGG AGAGCGGATG GGATACCTAT
GGTGACGTCG TAGTCTCCCT GGAGCGCTCC GACGCGCTGC ACACCGGTCA GTTCCGAACC
CGCTCGTCCG TCGACCCCGA CGTGAAAGTT GACAGCCGAC GGTCAGCACC ACCTCGCACT
GCAGGAGACG GATCAATGAG CCAGCCTCCC GGCTACGGAC AAGGACAGGG CCAGCCCGGC
TACGACCCCT ACGCGCAGGG CGGCTACGGC GGTCAGCAGC CTGGCTACGA CCAGCAGGGC
TACGGCCAAG GTGGTCAGCA GCAGGGCTAC GGCCAGGGCC AGCAGGGCTA CGACCAGCAG
GGCTACGGCC AAGGCGGTCA GCAGCCCGGC TACGACCAGG GCTACGGCCA GGGCGGTCAG
CCCGGCTACG GCCAGGGCCA GCAGGGCTAC GACCAGGGCT ACGGCCAGGG CGGCTACGGC
GGTCAGCAGC CCGGCTACGA CCAGCAGGGC TACGCGGGCG GTCAGCAGCC CGGCTACGGC
CAGGGCCAGC AGGGCTACGA CCAGGGCTAC GGCCAGGGCG GCGCAGGCTA CGACCAGGGC
GGCCAGGCCG GTTACGGCCA GCAGGCGGCG GGCTACGACC AGGCGGGCTA CGGCCAGCAG
GCCGCGGGCT ACGACCAGGG CTACGGCCAG CAGGCGGGCT ACGGCGGCGC CCCGGCGGGC
GGCGCGCAGC GCCAGCTGAG CGCGACCCTG CACCTGGACG ACGGGTCCAA CCGGACCTAC
AACCTGAAGC AGGGCGGCAA CGTGGTCGGC CGCGGCCAGG AGGCCGACTT CCGGCTCCCC
GACACCGGCG TCTCCAGGAG GCACCTGGAG ATCACCTGGG ACGGGCACAG TGCCATGCTC
GCCGATCTCG GCTCGACCAA CGGCACGACG GTGAACGGGA CCCCGGTGCA GACCTGGCAG
CTCGCGGAAG GCGACGTCGT CCGCATCGGC CACTCGTCGC TGGTCTTCCG CACACAGGGC
TGA
 
Protein sequence
MGLVQRFERR LEGMVGDTFA RVFGGNVVSQ EVAQALQREA DGNIRELAGG RLLAPNHYVV 
LLGPEDHDRL AGDGQDELRI TKSLGDSIQE HLEESGWDTY GDVVVSLERS DALHTGQFRT
RSSVDPDVKV DSRRSAPPRT AGDGSMSQPP GYGQGQGQPG YDPYAQGGYG GQQPGYDQQG
YGQGGQQQGY GQGQQGYDQQ GYGQGGQQPG YDQGYGQGGQ PGYGQGQQGY DQGYGQGGYG
GQQPGYDQQG YAGGQQPGYG QGQQGYDQGY GQGGAGYDQG GQAGYGQQAA GYDQAGYGQQ
AAGYDQGYGQ QAGYGGAPAG GAQRQLSATL HLDDGSNRTY NLKQGGNVVG RGQEADFRLP
DTGVSRRHLE ITWDGHSAML ADLGSTNGTT VNGTPVQTWQ LAEGDVVRIG HSSLVFRTQG